8DNT | pdb_00008dnt

SARS-CoV-2 specific T cell receptor


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
T [auth Z]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
O [auth T]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
J [auth L]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
T [auth Z]Polyketide_cyc2e8dntZ1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
O [auth T]Polyketide_cyc2e8dntT1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
J [auth L]Polyketide_cyc2e8dntL1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
E [auth F]Polyketide_cyc2e8dntF1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
S [auth Y]Polyketide_cyc2e8dntY1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
N [auth R]Spt4e8dntR1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Spt4ECOD (v294.1)
I [auth K]Polyketide_cyc2e8dntK1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
D [auth E]Polyketide_cyc2e8dntE1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
Q [auth W]Polyketide_cyc2e8dntW1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
L [auth P]Polyketide_cyc2e8dntP1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
G [auth I]Polyketide_cyc2e8dntI1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
BSpt4e8dntB1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Spt4ECOD (v294.1)
P [auth V]Polyketide_cyc2e8dntV1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
K [auth M]Polyketide_cyc2e8dntM1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
F [auth H]Polyketide_cyc2e8dntH1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
ASpt4e8dntA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Spt4ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth F],
J [auth L],
O [auth T],
T [auth Z]
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth F],
J [auth L],
O [auth T],
T [auth Z]
Beta-2-microglobulin
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
MHC class I antigen alpha chain-
C [auth D],
H [auth J],
M [auth Q],
R [auth X]
Nucleoprotein
B,
G [auth I],
L [auth P],
Q [auth W]
T-cell receptor beta chain---
A,
F [auth H],
K [auth M],
P [auth V]
T-cell receptor alpha chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth F],
J [auth L],
O [auth T],
T [auth Z]
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
E [auth F],
J [auth L],
O [auth T],
T [auth Z]
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
E [auth F],
J [auth L],
O [auth T],
T [auth Z]
IPR013783Immunoglobulin-like foldHomologous Superfamily
E [auth F],
J [auth L],
O [auth T],
T [auth Z]
IPR007110Immunoglobulin-like domainDomain
E [auth F],
J [auth L],
O [auth T],
T [auth Z]
IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
E [auth F],
J [auth L],
O [auth T],
T [auth Z]
IPR003597Immunoglobulin C1-setDomain
E [auth F],
J [auth L],
O [auth T],
T [auth Z]
IPR015707Beta-2-MicroglobulinFamily
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR050208Antigen-presenting and immune regulatory MHC class I-relatedFamily
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR037055MHC class I-like antigen recognition-like superfamilyHomologous Superfamily
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR003597Immunoglobulin C1-setDomain
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR013783Immunoglobulin-like foldHomologous Superfamily
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR011161MHC class I-like antigen recognition-likeDomain
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR007110Immunoglobulin-like domainDomain
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR001039MHC class I alpha chain, alpha1 alpha2 domainsDomain
D [auth E],
I [auth K],
N [auth R],
S [auth Y]
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
C [auth D],
H [auth J],
M [auth Q],
R [auth X]
IPR044344Nucleocapsid (N) protein, C-terminal domain, coronavirusDomain
C [auth D],
H [auth J],
M [auth Q],
R [auth X]
IPR043505Nucleocapsid protein, betacoronavirusFamily
C [auth D],
H [auth J],
M [auth Q],
R [auth X]
IPR001218Nucleocapsid protein, coronavirusFamily
C [auth D],
H [auth J],
M [auth Q],
R [auth X]
IPR037195Nucleocapsid protein, N-terminalHomologous Superfamily
C [auth D],
H [auth J],
M [auth Q],
R [auth X]
IPR037179Nucleocapsid protein, C-terminalHomologous Superfamily
C [auth D],
H [auth J],
M [auth Q],
R [auth X]
IPR044345Nucleocapsid (N) protein, N-terminal domain, coronavirusDomain