8D85 | pdb_00008d85

Cryo-EM structure of human IL-27 signaling complex: model containing the interaction core region


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth B]SCOP2B SuperfamilyFibronectin type III 8055533 3002063 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyFibronectin type III 8055145 3002063 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth D]F_UNCLASSIFIEDe8d85D1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: 4-helical cytokines (From Topology)T: 4-helical cytokinesF: F_UNCLASSIFIEDECOD (1.6)
D [auth B]F_UNCLASSIFIEDe8d85B2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)
C [auth A]F_UNCLASSIFIEDe8d85A2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)
A [auth C]F_UNCLASSIFIEDe8d85C1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth D]1.20.1250.10 Mainly Alpha Up-down Bundle Growth Hormone Chain: ACATH (utative)
C [auth A]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
A [auth C]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth B]PF00041Fibronectin type III domain (fn3)Fibronectin type III domainDomain
D [auth B]PF09240Interleukin-6 receptor alpha chain, binding (IL6Ra-bind)Interleukin-6 receptor alpha chain, bindingMembers of this family adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology. They are required for binding to the cytokine Interleukin-6 [1]. Domain
D [auth B]PF06328Ig-like C2-type domain (Lep_receptor_Ig)Ig-like C2-type domainThis domain is a ligand-binding immunoglobulin-like domain [1]. The two cysteine residues form a disulphide bridge. Domain
A [auth C]PF00041Fibronectin type III domain (fn3)Fibronectin type III domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth D]Interleukin-27 subunit alpha
D [auth B]Interleukin-6 receptor subunit beta
C [auth A]Interleukin-27 receptor subunit alpha
A [auth C]Interleukin-27 subunit beta

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth D]PharosQ8NEV9
D [auth B]PharosP40189
C [auth A]PharosQ6UWB1
A [auth C]PharosQ14213