Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCytidine deaminase-like8105521 3001838 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCore binding factor beta CBF8042548 3001169 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyUbiquitin-like8038575 3000157 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF18782e8cx0A1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: PF18782ECOD (1.6)
BPF00559e8cx0B1 A: a+b two layersX: Virion infectivity factor Vif (From Topology)H: Virion infectivity factor Vif (From Topology)T: Virion infectivity factor VifF: PF00559ECOD (1.6)
CPF02312e8cx0C1 A: beta barrelsX: CBF-likeH: Core binding factor beta, CBF (From Topology)T: Core binding factor beta, CBFF: PF02312ECOD (1.6)
DPF00240e8cx0D1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF00240ECOD (1.6)
EPF03931e8cx0E1 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: PF03931ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05240APOBEC-like C-terminal domain (APOBEC_C)APOBEC-like C-terminal domainThis domain is found at the C-termini of the Apolipoprotein B mRNA editing enzyme.Domain
PF18782Novel AID APOBEC clade 2 (NAD2)Novel AID APOBEC clade 2- Family
PF00559Retroviral Vif (Viral infectivity) protein (Vif)Retroviral Vif (Viral infectivity) protein- Family
PF02312Core binding factor beta subunit (CBF_beta)Core binding factor beta subunit- Family
PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
PF03931Skp1 family, tetramerisation domain (Skp1_POZ)Skp1 family, tetramerisation domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA dC->dU-editing enzyme APOBEC-3G
Virion infectivity factor
Core-binding factor subunit beta
Elongin-B
Elongin-C
F [auth K]RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*A)-3')---

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosQ9HC16
PharosQ13951
PharosQ15370
PharosQ15369