8CH4 | pdb_00008ch4

Crystal structure of the ring cleaving dioxygenase 5-nitrosalicylate 1,2-dioxygenase from Bradyrhizobium sp.

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DLNT_Ne8ch4D1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: LNT_NECOD (develop294)
CHistonee8ch4C1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HistoneECOD (develop294)
BHistonee8ch4B1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HistoneECOD (develop294)
AHistonee8ch4A1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HistoneECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
5-nitrosalicylic acid 1,2-dioxygenase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR011051RmlC-like cupin domain superfamilyHomologous Superfamily
A, B, C, D
IPR013096Cupin 2, conserved barrelDomain
A, B, C, D
IPR047183Gentisate 1,2-dioxygenase-likeFamily
A, B, C, D
IPR014710RmlC-like jelly roll foldHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, D
FME Parent Component: MET

RESID:  AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891