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 8CBG | pdb_00008cbg

The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tetrapeptide Arg-Gly-Leu-Leu

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyWinged helix DNA-binding domain 8017649 3000034 SCOP2B (2022-06-29)
ASCOP2B SuperfamilycAMP-binding domain-like 8017652 3000084 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWinged helix DNA-binding domain 8017649 3000034 SCOP2B (2022-06-29)
BSCOP2B SuperfamilycAMP-binding domain-like 8017652 3000084 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATSP_1e8cbgA01 A: alpha arraysX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: TSP_1ECOD (v295.2)
BFerritine8cbgB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: FerritinECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Listeriolysin regulatory protein -
C, D
peptide ARG-GLY-LEU-LEU---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR014710PpnP-like, jelly roll foldHomologous Superfamily
A, B
IPR018335Transcription regulator HTH, Crp-type, conserved siteConserved Site
A, B
IPR018490Cyclic nucleotide-binding domain superfamilyHomologous Superfamily
A, B
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
A, B
IPR012318Crp-type HTH domainDomain