8C7S
Transcriptional pleiotropic repressor CodY from Staphylococcus aureus in complex with Ile, GTP, and a 30-bp DNA fragment encompassing two overlapping binding sites
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | PF08222 | e8c7sA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF08222 | ECOD (1.6) |
C [auth A] | PF06018 | e8c7sA2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PF06018 | ECOD (1.6) |
D [auth B] | PF08222 | e8c7sB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF08222 | ECOD (1.6) |
D [auth B] | PF06018 | e8c7sB2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PF06018 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF08222 | CodY helix-turn-helix domain (HTH_CodY) | CodY helix-turn-helix domain | This family consists of the C-terminal helix-turn-helix domain found in several bacterial GTP-sensing transcriptional pleiotropic repressor CodY proteins. CodY has been found to repress the dipeptide transport operon (dpp) of Bacillus subtilis in nut ... | Domain |
C [auth A], D [auth B] | PF06018 | CodY GAF-like domain (CodY) | CodY GAF-like domain | This domain is a GAF-like domain found at the N-terminus of several bacterial GTP-sensing transcriptional pleiotropic repressor CodY proteins. This domain is involved in GTP binding and also branched chain amino acids (Matilla et. al., FEMS Microbiol ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR010312 | Global transcriptional regulator CodY, N-terminal | Domain |
C [auth A], D [auth B] | IPR029016 | GAF-like domain superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR013198 | Global transcriptional regulator CodY, C-terminal | Domain |
C [auth A], D [auth B] | IPR014154 | Global transcriptional regulator CodY | Family |
C [auth A], D [auth B] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |