Annotations: 8C24

ParDE1 toxin-antitoxin complex from Mycobacterium tuberculosis (rv1960c-rv1959c)

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	C1-set	e8c24A01	A: alpha arrays	X: Fe-binding domain in prismane-like proteins	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set	ECOD (v295)
B	Aminotran_1_2	e8c24B1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Aminotran_1_2	ECOD (v295)
C	C1-set	e8c24C01	A: alpha arrays	X: Fe-binding domain in prismane-like proteins	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set	ECOD (v295)
D	Aminotran_1_2	e8c24D1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Aminotran_1_2	ECOD (v295)
E	Aminotran_1_2	e8c24E1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Aminotran_1_2	ECOD (v295)
F	Aminotran_1_2	e8c24F1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Aminotran_1_2	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF05016	ParE toxin of type II toxin-antitoxin system, parDE (ParE_toxin)	ParE toxin of type II toxin-antitoxin system, parDE	ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralised by the antitoxin ParD. The family also encompasses RelE/ParE described in [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Toxin ParE1	-	biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction	-
C, D, E, F	Antitoxin ParD1	molecular sequestering activity toxin sequestering activity	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process response to stimulus response to chemical detoxification response to toxic substance	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR007712	Toxin-antitoxin system, RelE/ParE toxin family	Family
A, B	IPR051803	Type II TA system RelE-like toxin	Family
A, B	IPR028344	Toxin-antitoxin system, toxin component ParE1/4	Family
A, B	IPR035093	Toxin-antitoxin system, RelE/ParE toxin domain superfamily	Homologous Superfamily
C, D, E, F	IPR022789	Antitoxin ParD	Family
C, D, E, F	IPR038296	Antitoxin ParD superfamily	Homologous Superfamily
C, D, E, F	IPR010985	Ribbon-helix-helix	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8C24 | pdb_00008c24

ParDE1 toxin-antitoxin complex from Mycobacterium tuberculosis (rv1960c-rv1959c)

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage