8BTK

Structure of the TRAP complex with the Sec translocon and a translating ribosome

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L [auth BI]	SCOP2B Superfamily	Ribosomal protein L16p/L10e	8097320	3000884	SCOP2B (2022-06-29)
M [auth BJ]	SCOP2B Superfamily	RL5-like	8073894	3001709	SCOP2B (2022-06-29)
Q [auth BN]	SCOP2B Superfamily	Ribosomal proteins S24e L23 and L15e	8082477	3000210	SCOP2B (2022-06-29)
S [auth BP]	SCOP2B Superfamily	Ribosomal protein L22	8097828	3001078	SCOP2B (2022-06-29)
X [auth BU]	SCOP2B Superfamily	60S Ribosomal protein L22e	8061156	3002158	SCOP2B (2022-06-29)
Y [auth BV]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8072048	3000433	SCOP2B (2022-06-29)
AA [auth BX]	SCOP2B Superfamily	Ribosomal proteins S24e L23 and L15e	8095966	3000210	SCOP2B (2022-06-29)
BA [auth BY]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8076754	3000334	SCOP2B (2022-06-29)
CA [auth BZ]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8053047	3000334	SCOP2B (2022-06-29)
DA [auth Ba]	SCOP2B Superfamily	Ribosomal proteins L15p and L18e	8097818	3001045	SCOP2B (2022-06-29)
FA [auth Bc]	SCOP2B Superfamily	L30e-like	8094953	3001739	SCOP2B (2022-06-29)
HA [auth Be]	SCOP2B Superfamily	Ribosomal protein L32e	8102090	3000982	SCOP2B (2022-06-29)
IA [auth Bf]	SCOP2B Superfamily	Translational proteins	8093714	3000811	SCOP2B (2022-06-29)
JA [auth Bg]	SCOP2B Superfamily	Ribosomal protein L34e-like	8103328	3002203	SCOP2B (2022-06-29)
LA [auth Bi]	SCOP2B Superfamily	Ribosomal protein L36e	8053119	3002161	SCOP2B (2022-06-29)
NA [auth Bk]	SCOP2B Superfamily	Ribosomal L38e protein-like	8093716	3002206	SCOP2B (2022-06-29)
OA [auth Bl]	SCOP2B Superfamily	Ribosomal protein L39e	8095597	3001756	SCOP2B (2022-06-29)
RA [auth Bp]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8101435	3001320	SCOP2B (2022-06-29)
VA [auth Bv]	SCOP2B Superfamily	Ribosomal protein L1p/L10e-like	8065344	3001911	SCOP2B (2022-06-29)
WA [auth SX]	SCOP2B Superfamily	SecY-like	8056967	3000333	SCOP2B (2022-06-29)
E [auth BB]	SCOP2B Superfamily	Translational proteins	8078357	3000811	SCOP2B (2022-06-29)
XA [auth SY]	SCOP2B Superfamily	Protein translocase subunit SecE-like	8053309	3002174	SCOP2B (2022-06-29)
BB [auth AB]	SCOP2B Superfamily	Nucleic acid-binding proteins	8095265	3000135	SCOP2B (2022-06-29)
DB [auth AD]	SCOP2B Superfamily	Ribosomal protein S30e-like	8053455	3002190	SCOP2B (2022-06-29)
FB [auth AF]	SCOP2B Superfamily	WD40 repeat-like	8097816	3001694	SCOP2B (2022-06-29)
GB [auth AG]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8052584	3000068	SCOP2B (2022-06-29)
F [auth BC]	SCOP2B Superfamily	Ribosomal protein L4	8052829	3001146	SCOP2B (2022-06-29)
F [auth BC]	SCOP2B Superfamily	60S ribosomal protein L4 C-terminal domain-like	8052828	3002143	SCOP2B (2022-06-29)
JB [auth AZ]	SCOP2B Superfamily	SIS domain/Ribosomal protein S2-like	8097826	3001397	SCOP2B (2022-06-29)
KB [auth Aa]	SCOP2B Superfamily	Ribosomal S3Ae-like	8053216	3002166	SCOP2B (2022-06-29)
NB [auth Ad]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8052747	3000334	SCOP2B (2022-06-29)
NB [auth Ad]	SCOP2B Superfamily	Alpha-L RNA-binding motif	8052745	3001473	SCOP2B (2022-06-29)
NB [auth Ad]	SCOP2B Superfamily	Nucleic acid-binding proteins	8052746	3000135	SCOP2B (2022-06-29)
OB [auth Ae]	SCOP2B Superfamily	Ribosomal protein S7	8066001	3000799	SCOP2B (2022-06-29)
G [auth BD]	SCOP2B Superfamily	Translational machinery components	8052886	3000571	SCOP2B (2022-06-29)
RB [auth Ah]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8053075	3000433	SCOP2B (2022-06-29)
TB [auth Aj]	SCOP2B Superfamily	Winged helix DNA-binding domain	8055720	3000034	SCOP2B (2022-06-29)
UB [auth Ak]	SCOP2B Superfamily	Ribosomal S17 N-terminal domain-like	8052708	3002138	SCOP2B (2022-06-29)
UB [auth Ak]	SCOP2B Superfamily	Nucleic acid-binding proteins	8052707	3000135	SCOP2B (2022-06-29)
VB [auth Al]	SCOP2B Superfamily	L30e-like	8063980	3001739	SCOP2B (2022-06-29)
WB [auth Am]	SCOP2B Superfamily	Homeodomain-like	8052970	3000001	SCOP2B (2022-06-29)
WB [auth Am]	SCOP2B Superfamily	S15/NS1 RNA-binding domain	8052971	3001284	SCOP2B (2022-06-29)
XB [auth An]	SCOP2B Superfamily	Translational machinery components	8097832	3000571	SCOP2B (2022-06-29)
ZB [auth Ap]	SCOP2B Superfamily	Ribosomal protein S5 domain 2-like	8082683	3000100	SCOP2B (2022-06-29)
BC [auth Ar]	SCOP2B Superfamily	S13-like H2TH domain	8101439	3000053	SCOP2B (2022-06-29)
CC [auth As]	SCOP2B Superfamily	Winged helix DNA-binding domain	8089322	3000034	SCOP2B (2022-06-29)
DC [auth At]	SCOP2B Superfamily	Ribosomal protein S10	8097814	3001336	SCOP2B (2022-06-29)
FC [auth Av]	SCOP2B Superfamily	Ribosomal protein S8	8079081	3000709	SCOP2B (2022-06-29)
IC [auth Ay]	SCOP2B Superfamily	Winged helix DNA-binding domain	8090991	3000034	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth BG]	PF01248	e8btkBG1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: PF01248	ECOD (1.6)
K [auth BH]	PF00347	e8btkBH2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: PF00347	ECOD (1.6)
L [auth BI]	PF00252	e8btkBI1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: PF00252	ECOD (1.6)
M [auth BJ]	PF00281,PF00673	e8btkBJ1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: PF00281,PF00673	ECOD (1.6)
O [auth BL]	PF01294	e8btkBL1	A: extended segments	X: RPL13 (From Topology)	H: RPL13 (From Topology)	T: RPL13	F: PF01294	ECOD (1.6)
P [auth BM]	PF00467,PF01929	e8btkBM1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF00467,PF01929	ECOD (1.6)
Q [auth BN]	PF00827	e8btkBN1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: PF00827	ECOD (1.6)
R [auth BO]	PF00572	e8btkBO1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: PF00572	ECOD (1.6)
S [auth BP]	PF00237	e8btkBP1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: PF00237	ECOD (1.6)
T [auth BQ]	PF17135	e8btkBQ1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: PF17135	ECOD (1.6)
U [auth BR]	PF01280	e8btkBR2	A: alpha arrays	X: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) N-terminal domain	F: PF01280	ECOD (1.6)
U [auth BR]	PF01280	e8btkBR1	A: alpha bundles	X: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) C-terminal domain	F: PF01280	ECOD (1.6)
V [auth BS]	F_UNCLASSIFIED	e8btkBS2	A: a+b two layers	X: GP2-like	H: RplX-like (From Topology)	T: RplX-like	F: F_UNCLASSIFIED	ECOD (1.6)
V [auth BS]	PF01775	e8btkBS1	A: a+b two layers	X: GP2-like	H: RplX-like (From Topology)	T: RplX-like	F: PF01775	ECOD (1.6)
W [auth BT]	PF01157	e8btkBT1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF01157	ECOD (1.6)
X [auth BU]	PF01776	e8btkBU1	A: a+b two layers	X: Ribosomal protein L22e (From Topology)	H: Ribosomal protein L22e (From Topology)	T: Ribosomal protein L22e	F: PF01776	ECOD (1.6)
Y [auth BV]	PF00238	e8btkBV1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: PF00238	ECOD (1.6)
Z [auth BW]	PF01246	e8btkBW1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: PF01246	ECOD (1.6)
AA [auth BX]	PF00276,PF03939	e8btkBX1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: PF00276,PF03939	ECOD (1.6)
BA [auth BY]	PF16906	e8btkBY1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF16906	ECOD (1.6)
CA [auth BZ]	PF00467,PF01777	e8btkBZ1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF00467,PF01777	ECOD (1.6)
DA [auth Ba]	PF00828	e8btkBa1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: PF00828	ECOD (1.6)
EA [auth Bb]	PF01779	e8btkBb1	A: extended segments	X: RPL29 (From Topology)	H: RPL29 (From Topology)	T: RPL29	F: PF01779	ECOD (1.6)
FA [auth Bc]	PF01248	e8btkBc1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: PF01248	ECOD (1.6)
GA [auth Bd]	PF01198	e8btkBd1	A: a+b two layers	X: Ribosomal protein L31e-like	H: Ribosomal protein L31e/gp120 outer domain (From Topology)	T: Ribosomal protein L31e/gp120 outer domain	F: PF01198	ECOD (1.6)
HA [auth Be]	PF01655	e8btkBe1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L32e (From Topology)	T: Ribosomal protein L32e	F: PF01655	ECOD (1.6)
IA [auth Bf]	PF01247	e8btkBf1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF01247	ECOD (1.6)
JA [auth Bg]	PF01199	e8btkBg1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: RPL34 (From Topology)	T: RPL34	F: PF01199	ECOD (1.6)
KA [auth Bh]	PF00831	e8btkBh1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: PF00831	ECOD (1.6)
LA [auth Bi]	PF01158	e8btkBi1	A: alpha arrays	X: 60S ribosomal protein rpL36 (L36e) (From Topology)	H: 60S ribosomal protein rpL36 (L36e) (From Topology)	T: 60S ribosomal protein rpL36 (L36e)	F: PF01158	ECOD (1.6)
MA [auth Bj]	PF01907	e8btkBj1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01907	ECOD (1.6)
D [auth BA]	PF00181	e8btkBA1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00181	ECOD (1.6)
D [auth BA]	PF03947	e8btkBA2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF03947	ECOD (1.6)
NA [auth Bk]	PF01781	e8btkBk1	A: a+b two layers	X: SRP9/14-like	H: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)	T: Signal recognition particle alu RNA binding heterodimer SRP9/14-related	F: PF01781	ECOD (1.6)
OA [auth Bl]	PF00832	e8btkBl1	A: extended segments	X: Ribosomal protein L39e (From Topology)	H: Ribosomal protein L39e (From Topology)	T: Ribosomal protein L39e	F: PF00832	ECOD (1.6)
PA [auth Bm]	PF01020	e8btkBm1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01020	ECOD (1.6)
QA [auth Bo]	PF00935	e8btkBo1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF00935	ECOD (1.6)
RA [auth Bp]	PF01780	e8btkBp1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01780	ECOD (1.6)
SA [auth Br]	PF01778	e8btkBr1	A: a+b two layers	X: RPL28 (From Topology)	H: RPL28 (From Topology)	T: RPL28	F: PF01778	ECOD (1.6)
TA [auth Bs]	PF00466	e8btkBs1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein L10-like (From Topology)	T: Ribosomal protein L10-like	F: PF00466	ECOD (1.6)
TA [auth Bs]	PF17777	e8btkBs2	A: a+b two layers	X: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)	H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)	T: Insertion domain in 60S ribosomal protein rpP0 (L10P)	F: PF17777	ECOD (1.6)
UA [auth Bt]	PF00298	e8btkBt1	A: alpha arrays	X: HTH	H: HTH	T: Ribosomal protein L11, C-terminal domain	F: PF00298	ECOD (1.6)
UA [auth Bt]	PF03946	e8btkBt2	A: a+b two layers	X: Ribosomal protein L11/L12e N-terminal domain-like	H: Ribosomal protein L11/L12e N-terminal domain (From Topology)	T: Ribosomal protein L11/L12e N-terminal domain	F: PF03946	ECOD (1.6)
VA [auth Bv]	PF00687	e8btkBv1	A: a+b two layers	X: a+b domain in Ribosomal protein L1 (From Topology)	H: a+b domain in Ribosomal protein L1 (From Topology)	T: a+b domain in Ribosomal protein L1	F: PF00687	ECOD (1.6)
VA [auth Bv]	PF00687	e8btkBv2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Rossmann-like domain in Ribosomal protein L1 (From Topology)	T: Rossmann-like domain in Ribosomal protein L1	F: PF00687	ECOD (1.6)
WA [auth SX]	PF00344,PF10559	e8btkSX1	A: alpha complex topology	X: Preprotein translocase SecY subunit (From Topology)	H: Preprotein translocase SecY subunit (From Topology)	T: Preprotein translocase SecY subunit	F: PF00344,PF10559	ECOD (1.6)
E [auth BB]	PF00297	e8btkBB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF00297	ECOD (1.6)
XA [auth SY]	PF00584	e8btkSY1	A: extended segments	X: Preprotein translocase SecE subunit (From Topology)	H: Preprotein translocase SecE subunit (From Topology)	T: Preprotein translocase SecE subunit	F: PF00584	ECOD (1.6)
YA [auth SZ]	PF03911	e8btkSZ1	A: extended segments	X: Sec-beta subunit (From Topology)	H: Sec-beta subunit (From Topology)	T: Sec-beta subunit	F: PF03911	ECOD (1.6)
AB [auth AA]	PF01667	e8btkAA1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01667	ECOD (1.6)
BB [auth AB]	PF01200	e8btkAB1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF01200	ECOD (1.6)
CB [auth AC]	PF01599	e8btkAC1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01599	ECOD (1.6)
DB [auth AD]	PF04758	e8btkAD1	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: PF04758	ECOD (1.6)
EB [auth AE]	PF01283	e8btkAE1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: PF01283	ECOD (1.6)
FB [auth AF]	PF00400	e8btkAF1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: PF00400	ECOD (1.6)
GB [auth AG]	PF00253	e8btkAG1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: PF00253	ECOD (1.6)
F [auth BC]	PF00573	e8btkBC2	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: PF00573	ECOD (1.6)
F [auth BC]	PF14374	e8btkBC1	A: extended segments	X: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	T: C-terminal helical region in 60S ribosomal protein L4 (L4p)	F: PF14374	ECOD (1.6)
JB [auth AZ]	PF00318,PF16122	e8btkAZ1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: PF00318,PF16122	ECOD (1.6)
KB [auth Aa]	PF01015	e8btkAa1	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: PF01015	ECOD (1.6)
KB [auth Aa]	PF01015	e8btkAa2	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: PF01015	ECOD (1.6)
LB [auth Ab]	PF03719	e8btkAb1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: PF03719	ECOD (1.6)
LB [auth Ab]	PF00333	e8btkAb3	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: PF00333	ECOD (1.6)
LB [auth Ab]	PF00333	e8btkAb2	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: PF00333	ECOD (1.6)
MB [auth Ac]	PF00189	e8btkAc2	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: PF00189	ECOD (1.6)
MB [auth Ac]	PF07650	e8btkAc1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: PF07650	ECOD (1.6)
NB [auth Ad]	PF00900	e8btkAd3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00900	ECOD (1.6)
NB [auth Ad]	PF00467,PF16121	e8btkAd1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF00467,PF16121	ECOD (1.6)
NB [auth Ad]	PF00900,PF01479,PF08071	e8btkAd2	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: PF00900,PF01479,PF08071	ECOD (1.6)
OB [auth Ae]	PF00177	e8btkAe1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: PF00177	ECOD (1.6)
PB [auth Af]	PF01092	e8btkAf1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: PF01092	ECOD (1.6)
QB [auth Ag]	PF01251	e8btkAg2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: PF01251	ECOD (1.6)
G [auth BD]	PF14204,PF17144	e8btkBD1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: PF14204,PF17144	ECOD (1.6)
RB [auth Ah]	PF01201	e8btkAh1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: PF01201	ECOD (1.6)
SB [auth Ai]	PF00163,PF01479	e8btkAi1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: PF00163,PF01479	ECOD (1.6)
TB [auth Aj]	PF03501	e8btkAj1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF03501	ECOD (1.6)
UB [auth Ak]	PF00366,PF16205	e8btkAk1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00366,PF16205	ECOD (1.6)
VB [auth Al]	PF01248	e8btkAl1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: PF01248	ECOD (1.6)
WB [auth Am]	PF08069	e8btkAm2	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: PF08069	ECOD (1.6)
WB [auth Am]	PF00312	e8btkAm1	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: PF00312	ECOD (1.6)
XB [auth An]	PF00411	e8btkAn1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: PF00411	ECOD (1.6)
YB [auth Ao]	PF00203	e8btkAo1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: PF00203	ECOD (1.6)
ZB [auth Ap]	PF00380	e8btkAp1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: PF00380	ECOD (1.6)
AC [auth Aq]	PF00833	e8btkAq1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: PF00833	ECOD (1.6)
H [auth BE]	PF01159,PF03868	e8btkBE1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF01159,PF03868	ECOD (1.6)
BC [auth Ar]	PF00416	e8btkAr1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: PF00416	ECOD (1.6)
CC [auth As]	PF01090	e8btkAs1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF01090	ECOD (1.6)
DC [auth At]	PF00338	e8btkAt1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: PF00338	ECOD (1.6)
EC [auth Au]	PF01249	e8btkAu1	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: PF01249	ECOD (1.6)
FC [auth Av]	PF00410	e8btkAv1	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: PF00410	ECOD (1.6)
FC [auth Av]	PF00410	e8btkAv2	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: PF00410	ECOD (1.6)
GC [auth Aw]	PF00164	e8btkAw1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00164	ECOD (1.6)
HC [auth Ax]	PF01282	e8btkAx1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: PF01282	ECOD (1.6)
IC [auth Ay]	PF03297	e8btkAy1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF03297	ECOD (1.6)
JC [auth Az]	PF05162	e8btkAz1	A: extended segments	X: Ribosomal protein L41-A (From Topology)	H: Ribosomal protein L41-A (From Topology)	T: Ribosomal protein L41-A	F: PF05162	ECOD (1.6)
I [auth BF]	PF00327,PF08079	e8btkBF1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: PF00327,PF08079	ECOD (1.6)
LC [auth TB]	PF05753	e8btkTB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF05753	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
J [auth BG]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
K [auth BH]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6	-	Domain
L [auth BI]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e	-	Domain
M [auth BJ]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5	-	Domain
M [auth BJ]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
O [auth BL]	PF01294	Ribosomal protein L13e (Ribosomal_L13e)	Ribosomal protein L13e	-	Family
P [auth BM]	PF01929	Ribosomal protein L14 (Ribosomal_L14e)	Ribosomal protein L14	-	Family
Q [auth BN]	PF00827	Ribosomal L15 (Ribosomal_L15e)	Ribosomal L15	-	Family
R [auth BO]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
S [auth BP]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
T [auth BQ]	PF17135	Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)	Ribosomal protein 60S L18 and 50S L18e	-	Family
U [auth BR]	PF01280	Ribosomal protein L19e (Ribosomal_L19e)	Ribosomal protein L19e	-	Family
V [auth BS]	PF01775	Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)	Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A	This family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.	Domain
W [auth BT]	PF01157	Ribosomal protein L21e (Ribosomal_L21e)	Ribosomal protein L21e	-	Family
X [auth BU]	PF01776	Ribosomal L22e protein family (Ribosomal_L22e)	Ribosomal L22e protein family	-	Family
Y [auth BV]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e	-	Domain
Z [auth BW]	PF01246	Ribosomal protein L24e (Ribosomal_L24e)	Ribosomal protein L24e	-	Domain
AA [auth BX]	PF03939	Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)	Ribosomal protein L23, N-terminal domain	-	Family
AA [auth BX]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
BA [auth BY]	PF16906	Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)	Ribosomal proteins L26 eukaryotic, L24P archaeal	-	Family
BA [auth BY]	PF00467	KOW motif (KOW)	KOW motif	-	Family
CA [auth BZ]	PF01777	Ribosomal L27e protein family (Ribosomal_L27e)	Ribosomal L27e protein family	-	Family
CA [auth BZ]	PF00467	KOW motif (KOW)	KOW motif	-	Family
DA [auth Ba]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	-	Family
EA [auth Bb]	PF01779	Ribosomal L29e protein family (Ribosomal_L29e)	Ribosomal L29e protein family	-	Family
FA [auth Bc]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
GA [auth Bd]	PF01198	Ribosomal protein L31e (Ribosomal_L31e)	Ribosomal protein L31e	-	Family
HA [auth Be]	PF01655	Ribosomal protein L32 (Ribosomal_L32e)	Ribosomal protein L32	-	Family
IA [auth Bf]	PF01247	Ribosomal protein L35Ae (Ribosomal_L35Ae)	Ribosomal protein L35Ae	-	Domain
JA [auth Bg]	PF01199	Ribosomal protein L34e (Ribosomal_L34e)	Ribosomal protein L34e	-	Family
KA [auth Bh]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
LA [auth Bi]	PF01158	Ribosomal protein L36e (Ribosomal_L36e)	Ribosomal protein L36e	-	Family
MA [auth Bj]	PF01907	Ribosomal protein L37e (Ribosomal_L37e)	Ribosomal protein L37e	-	Family
D [auth BA]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain	-	Domain
D [auth BA]	PF00181	Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)	Ribosomal Proteins L2, RNA binding domain	-	Domain
NA [auth Bk]	PF01781	Ribosomal L38e protein family (Ribosomal_L38e)	Ribosomal L38e protein family	-	Family
OA [auth Bl]	PF00832	Ribosomal L39 protein (Ribosomal_L39)	Ribosomal L39 protein	-	Family
QA [auth Bo]	PF00935	Ribosomal protein L44 (Ribosomal_L44)	Ribosomal protein L44	-	Family
RA [auth Bp]	PF01780	Ribosomal L37ae protein family (Ribosomal_L37ae)	Ribosomal L37ae protein family	-	Family
SA [auth Br]	PF01778	Ribosomal L28e protein family (Ribosomal_L28e)	Ribosomal L28e protein family	-	Family
TA [auth Bs]	PF17777	Insertion domain in 60S ribosomal protein L10P (RL10P_insert)	Insertion domain in 60S ribosomal protein L10P	This domain is found in prokaryotic and archaeal ribosomal L10 protein [1].	Domain
TA [auth Bs]	PF00466	Ribosomal protein L10 (Ribosomal_L10)	Ribosomal protein L10	-	Family
UA [auth Bt]	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
UA [auth Bt]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain	-	Domain
VA [auth Bv]	PF00687	Ribosomal protein L1p/L10e family (Ribosomal_L1)	Ribosomal protein L1p/L10e family	This family includes prokaryotic L1 and eukaryotic L10.	Domain
WA [auth SX]	PF10559	Plug domain of Sec61p (Plug_translocon)	Plug domain of Sec61p	The Sec61/SecY translocon mediates translocation of proteins across the membrane and integration of membrane proteins into the lipid bilayer. The structure of the translocon revealed a plug domain blocking the pore on the lumenal side.The plug is unl ...	The Sec61/SecY translocon mediates translocation of proteins across the membrane and integration of membrane proteins into the lipid bilayer. The structure of the translocon revealed a plug domain blocking the pore on the lumenal side.The plug is unlikely to be important for sealing the translocation pore in yeast but it plays a role in stabilising Sec61p during translocon formation. The domain runs from residues 52-74 [1].	Domain
WA [auth SX]	PF00344	SecY (SecY)	SecY	-	Family
E [auth BB]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
XA [auth SY]	PF00584	SecE/Sec61-gamma subunits of protein translocation complex (SecE)	SecE/Sec61-gamma subunits of protein translocation complex	-	Family
YA [auth SZ]	PF03911	Sec61beta family (Sec61_beta)	Sec61beta family	-	Family
AB [auth AA]	PF01667	Ribosomal protein S27 (Ribosomal_S27e)	Ribosomal protein S27	-	Family
BB [auth AB]	PF01200	Ribosomal protein S28e (Ribosomal_S28e)	Ribosomal protein S28e	-	Family
CB [auth AC]	PF01599	Ribosomal protein S27a (Ribosomal_S27)	Ribosomal protein S27a	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].	Domain
DB [auth AD]	PF04758	Ribosomal protein S30 (Ribosomal_S30)	Ribosomal protein S30	-	Family
EB [auth AE]	PF01283	Ribosomal protein S26e (Ribosomal_S26e)	Ribosomal protein S26e	-	Family
FB [auth AF]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
GB [auth AG]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
F [auth BC]	PF14374	60S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)	60S ribosomal protein L4 C-terminal domain	This family is found at the very C-terminal of 60 ribosomal L4 proteins.	Domain
F [auth BC]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
JB [auth AZ]	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
JB [auth AZ]	PF16122	40S ribosomal protein SA C-terminus (40S_SA_C)	40S ribosomal protein SA C-terminus	-	Family
MB [auth Ac]	PF07650	KH domain (KH_2)	KH domain	-	Domain
MB [auth Ac]	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
NB [auth Ad]	PF00900	Ribosomal family S4e (Ribosomal_S4e)	Ribosomal family S4e	-	Family
NB [auth Ad]	PF16121	40S ribosomal protein S4 C-terminus (40S_S4_C)	40S ribosomal protein S4 C-terminus	-	Family
NB [auth Ad]	PF08071	RS4NT (NUC023) domain (RS4NT)	RS4NT (NUC023) domain	This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].	Domain
NB [auth Ad]	PF00467	KOW motif (KOW)	KOW motif	-	Family
OB [auth Ae]	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
PB [auth Af]	PF01092	Ribosomal protein S6e (Ribosomal_S6e)	Ribosomal protein S6e	-	Family
QB [auth Ag]	PF01251	Ribosomal protein S7e (Ribosomal_S7e)	Ribosomal protein S7e	-	Family
G [auth BD]	PF17144	Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)	Ribosomal large subunit proteins 60S L5, and 50S L18	-	Family
G [auth BD]	PF14204	Ribosomal L18 C-terminal region (Ribosomal_L18_c)	Ribosomal L18 C-terminal region	This domain is the C-terminal end of ribosomal L18/L5 proteins.	Domain
RB [auth Ah]	PF01201	Ribosomal protein S8e (Ribosomal_S8e)	Ribosomal protein S8e	-	Family
SB [auth Ai]	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
SB [auth Ai]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
TB [auth Aj]	PF03501	Plectin/S10 domain (S10_plectin)	Plectin/S10 domain	This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.	Domain
UB [auth Ak]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17	-	Domain
UB [auth Ak]	PF16205	Ribosomal_S17 N-terminal (Ribosomal_S17_N)	Ribosomal_S17 N-terminal	-	Family
VB [auth Al]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
WB [auth Am]	PF08069	Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)	Ribosomal S13/S15 N-terminal domain	This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].	Domain
WB [auth Am]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15	-	Domain
XB [auth An]	PF00411	Ribosomal protein S11 (Ribosomal_S11)	Ribosomal protein S11	-	Family
YB [auth Ao]	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19	-	Domain
ZB [auth Ap]	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
AC [auth Aq]	PF00833	Ribosomal S17 (Ribosomal_S17e)	Ribosomal S17	-	Family
H [auth BE]	PF03868	Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)	Ribosomal protein L6, N-terminal domain	-	Domain
H [auth BE]	PF01159	Ribosomal protein L6e (Ribosomal_L6e)	Ribosomal protein L6e	-	Family
BC [auth Ar]	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
CC [auth As]	PF01090	Ribosomal protein S19e (Ribosomal_S19e)	Ribosomal protein S19e	-	Family
DC [auth At]	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
EC [auth Au]	PF01249	Ribosomal protein S21e (Ribosomal_S21e)	Ribosomal protein S21e	-	Family
FC [auth Av]	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8	-	Domain
GC [auth Aw]	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	-	Family
HC [auth Ax]	PF01282	Ribosomal protein S24e (Ribosomal_S24e)	Ribosomal protein S24e	-	Family
IC [auth Ay]	PF03297	S25 ribosomal protein (Ribosomal_S25)	S25 ribosomal protein	-	Family
JC [auth Az]	PF05162	Ribosomal protein L41 (Ribosomal_L41)	Ribosomal protein L41	-	Family
KC [auth TA]	PF03896	Translocon-associated protein (TRAP), alpha subunit (TRAP_alpha)	Translocon-associated protein (TRAP), alpha subunit	-	Family
I [auth BF]	PF08079	Ribosomal L30 N-terminal domain (Ribosomal_L30_N)	Ribosomal L30 N-terminal domain	This presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].	Domain
I [auth BF]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
LC [auth TB]	PF05753	Translocon-associated protein beta (TRAPB) (TRAP_beta)	Translocon-associated protein beta (TRAPB)	-	Family
MC [auth TC]	PF07074	Translocon-associated protein, gamma subunit (TRAP-gamma) (TRAP-gamma)	Translocon-associated protein, gamma subunit (TRAP-gamma)	-	Family
NC [auth TD]	PF05404	Translocon-associated protein, delta subunit precursor (TRAP-delta) (TRAP-delta)	Translocon-associated protein, delta subunit precursor (TRAP-delta)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B5]	28S rRNA	-	-	-
J [auth BG]	60S ribosomal protein L7a	-	-	-
K [auth BH]	60S ribosomal protein L9	-	-	-
L [auth BI]	Ribosomal protein L10	-	-	-
M [auth BJ]	Ribosomal protein L11	-	-	-
N [auth BK]	Nascent chain	-	-	-
O [auth BL]	L13	-	-	-
P [auth BM]	Ribosomal protein L14	-	-	-
Q [auth BN]	Ribosomal protein L15	-	-	-
R [auth BO]	60S ribosomal protein L13a	structural molecule activity structural constituent of ribosome	regulation of cellular process cellular biosynthetic process organonitrogen compound biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression organic substance metabolic process organic substance biosynthetic process protein metabolic process regulation of biosynthetic process regulation of biological process organonitrogen compound metabolic process cellular metabolic process regulation of protein metabolic process biological regulation regulation of cellular process cellular biosynthetic process organonitrogen compound biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression organic substance metabolic process organic substance biosynthetic process protein metabolic process regulation of biosynthetic process regulation of biological process organonitrogen compound metabolic process cellular metabolic process regulation of protein metabolic process biological regulation regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process regulation of translation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome large ribosomal subunit non-membrane-bounded organelle
S [auth BP]	uL22	-	-	-
B [auth B7]	5S rRNA	-	-	-
T [auth BQ]	eL18	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process cytoplasmic translation metabolic process cellular process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle protein-containing complex ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol large ribosomal subunit rough endoplasmic reticulum endoplasmic reticulum endomembrane system
U [auth BR]	60S ribosomal protein L19	RNA binding binding organic cyclic compound binding nucleic acid binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure cellular anatomical entity intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cytoplasm cytosol large ribosomal subunit protein-containing complex intracellular anatomical structure cellular anatomical entity intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cytoplasm cytosol large ribosomal subunit non-membrane-bounded organelle
V [auth BS]	60S ribosomal protein L18a	-	-	-
W [auth BT]	60S ribosomal protein L21	-	-	-
X [auth BU]	60S ribosomal protein L22	-	-	-
Y [auth BV]	Ribosomal protein L23	-	-	-
Z [auth BW]	Ribosomal protein L24	-	-	-
AA [auth BX]	Ribosomal_L23eN domain-containing protein	-	-	-
BA [auth BY]	Ribosomal protein L26	-	-	-
CA [auth BZ]	60S ribosomal protein L27	-	-	-
C [auth B8]	5.8S rRNA	-	-	-
DA [auth Ba]	60S ribosomal protein L27a	-	-	-
EA [auth Bb]	60S ribosomal protein L29	-	-	-
FA [auth Bc]	eL30	-	-	-
GA [auth Bd]	Ribosomal protein L31	-	-	-
HA [auth Be]	eL32	-	-	-
IA [auth Bf]	60S ribosomal protein L35a	-	-	-
JA [auth Bg]	60S ribosomal protein L34	-	-	-
KA [auth Bh]	60S ribosomal protein L35	-	-	-
LA [auth Bi]	60S ribosomal protein L36	-	-	-
MA [auth Bj]	Ribosomal protein L37	-	-	-
D [auth BA]	60S ribosomal protein L8	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
NA [auth Bk]	eL38	-	-	-
OA [auth Bl]	eL39	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
PA [auth Bm]	Ubiquitin	-	-	intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
QA [auth Bo]	eL42	-	-	-
RA [auth Bp]	eL43	-	-	-
SA [auth Br]	60S ribosomal protein L28	-	-	-
TA [auth Bs]	60S acidic ribosomal protein P0	-	-	-
UA [auth Bt]	Ribosomal protein L12	-	-	-
VA [auth Bv]	Ribosomal protein uL1	-	-	-
WA [auth SX]	Protein transport protein Sec61 subunit alpha isoform 1	macromolecule transmembrane transporter activity protein transporter activity protein transmembrane transporter activity transporter activity transmembrane transporter activity signal sequence binding binding peptide binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding	developmental process multicellular organismal process pronephric nephron development animal organ development renal system development multicellular organism development pronephros development anatomical structure development nephron development kidney development system development protein localization membrane organization cellular localization developmental process multicellular organismal process pronephric nephron development animal organ development renal system development multicellular organism development pronephros development anatomical structure development nephron development kidney development system development protein localization membrane organization cellular localization establishment of protein localization establishment of protein localization to membrane localization within membrane protein localization to membrane endoplasmic reticulum organization establishment of localization cellular component organization localization organelle organization protein localization to organelle cellular macromolecule localization macromolecule localization cellular process cellular component organization or biogenesis protein insertion into membrane protein insertion into ER membrane endomembrane system organization protein targeting protein targeting to membrane cotranslational protein targeting to membrane nitrogen compound transport transport protein transmembrane transport establishment of localization in cell post-translational protein targeting to membrane, translocation establishment of protein localization to endoplasmic reticulum protein localization to endoplasmic reticulum intracellular protein transmembrane transport organic substance transport intracellular transport post-translational protein targeting to endoplasmic reticulum membrane transmembrane transport establishment of protein localization to organelle protein transport intracellular protein transport protein targeting to ER SRP-dependent cotranslational protein targeting to membrane SRP-dependent cotranslational protein targeting to membrane, translocation	membrane-bounded organelle protein-containing complex intracellular anatomical structure Sec61 translocon complex membrane protein complex endomembrane system rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle bounding membrane of organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane organelle subcompartment membrane-bounded organelle protein-containing complex intracellular anatomical structure Sec61 translocon complex membrane protein complex endomembrane system rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle bounding membrane of organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle translocon complex rough endoplasmic reticulum membrane organelle endoplasmic reticulum cytoplasm organelle membrane
E [auth BB]	Ribosomal protein L3	-	-	-
XA [auth SY]	Protein transport protein Sec61 subunit gamma	macromolecule transmembrane transporter activity protein transporter activity protein transmembrane transporter activity transporter activity transmembrane transporter activity binding phospholipid binding lipid binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding	cellular process membrane docking protein localization establishment of protein localization cellular localization nitrogen compound transport transport protein targeting localization protein transmembrane transport cellular macromolecule localization establishment of localization in cell post-translational protein targeting to membrane, translocation establishment of protein localization to endoplasmic reticulum cellular process membrane docking protein localization establishment of protein localization cellular localization nitrogen compound transport transport protein targeting localization protein transmembrane transport cellular macromolecule localization establishment of localization in cell post-translational protein targeting to membrane, translocation establishment of protein localization to endoplasmic reticulum protein localization to endoplasmic reticulum establishment of protein localization to membrane intracellular protein transmembrane transport organic substance transport intracellular transport post-translational protein targeting to endoplasmic reticulum membrane localization within membrane protein localization to membrane establishment of localization protein targeting to membrane transmembrane transport establishment of protein localization to organelle protein transport macromolecule localization protein localization to organelle intracellular protein transport protein targeting to ER	membrane-bounded organelle protein-containing complex intracellular anatomical structure membrane protein complex endomembrane system rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle bounding membrane of organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane Ssh1 translocon complex organelle subcompartment membrane-bounded organelle protein-containing complex intracellular anatomical structure membrane protein complex endomembrane system rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle bounding membrane of organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane Ssh1 translocon complex organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle translocon complex rough endoplasmic reticulum membrane organelle endoplasmic reticulum cytoplasm organelle membrane
YA [auth SZ]	Protein transport protein Sec61 subunit beta	macromolecule transmembrane transporter activity active transmembrane transporter activity protein transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity protein transmembrane transporter activity protein-transporting ATPase activity transporter activity transmembrane transporter activity ATP-dependent activity ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding	protein localization establishment of protein localization cellular localization nitrogen compound transport transport protein targeting localization protein transmembrane transport cellular macromolecule localization establishment of localization in cell post-translational protein targeting to membrane, translocation establishment of protein localization to endoplasmic reticulum protein localization to endoplasmic reticulum establishment of protein localization to membrane protein localization establishment of protein localization cellular localization nitrogen compound transport transport protein targeting localization protein transmembrane transport cellular macromolecule localization establishment of localization in cell post-translational protein targeting to membrane, translocation establishment of protein localization to endoplasmic reticulum protein localization to endoplasmic reticulum establishment of protein localization to membrane intracellular protein transmembrane transport organic substance transport intracellular transport post-translational protein targeting to endoplasmic reticulum membrane localization within membrane protein localization to membrane establishment of localization protein targeting to membrane transmembrane transport establishment of protein localization to organelle protein transport macromolecule localization protein localization to organelle cellular process intracellular protein transport protein targeting to ER SRP-dependent cotranslational protein targeting to membrane cotranslational protein targeting to membrane SRP-dependent cotranslational protein targeting to membrane, translocation	membrane-bounded organelle protein-containing complex intracellular anatomical structure Sec61 translocon complex membrane protein complex endomembrane system rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle bounding membrane of organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane organelle subcompartment membrane-bounded organelle protein-containing complex intracellular anatomical structure Sec61 translocon complex membrane protein complex endomembrane system rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle bounding membrane of organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle translocon complex rough endoplasmic reticulum membrane organelle endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum Sec complex
ZA [auth A2]	18S rRNA	-	-	-
AB [auth AA]	40S ribosomal protein S27	-	-	-
BB [auth AB]	Ribosomal protein S28	-	-	-
CB [auth AC]	Ribosomal protein S27a	-	-	-
DB [auth AD]	40S ribosomal protein S30	-	-	-
EB [auth AE]	eS26	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
FB [auth AF]	RACK1	-	-	-
GB [auth AG]	uS14	-	-	-
F [auth BC]	60S ribosomal protein L4	-	-	-
HB [auth AH]	mRNA	-	-	-
IB [auth AT]	P-site tRNA	-	-	-
JB [auth AZ]	40S ribosomal protein SA	-	-	-
KB [auth Aa]	40S ribosomal protein S3a	-	-	-
LB [auth Ab]	Ribosomal_S5_C domain-containing protein,40S ribosomal protein S2	RNA binding binding organic cyclic compound binding nucleic acid binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle cytosolic ribosome cytoplasm cytosol
MB [auth Ac]	40S ribosomal protein S3	-	-	-
NB [auth Ad]	40S ribosomal protein S4	-	-	-
OB [auth Ae]	Ribosomal protein S5	-	-	-
PB [auth Af]	40S ribosomal protein S6	-	-	-
QB [auth Ag]	40S ribosomal protein S7	-	-	-
G [auth BD]	Ribosomal_L18_c domain-containing protein	RNA binding binding organic cyclic compound binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
RB [auth Ah]	40S ribosomal protein S8	-	-	-
SB [auth Ai]	Ribosomal protein S9 (Predicted)	-	-	-
TB [auth Aj]	Ribosomal protein eS10	-	-	-
UB [auth Ak]	40S ribosomal protein S11	-	-	-
VB [auth Al]	40S ribosomal protein S12	-	-	-
WB [auth Am]	uS15	-	-	-
XB [auth An]	40S ribosomal protein S14	-	-	-
YB [auth Ao]	40S ribosomal protein uS19	-	-	-
ZB [auth Ap]	uS9	-	-	-
AC [auth Aq]	40S ribosomal protein eS17	-	-	-
H [auth BE]	60S ribosomal protein L6	-	-	-
BC [auth Ar]	40S ribosomal protein S18	-	-	-
CC [auth As]	40S ribosomal protein S19	-	-	-
DC [auth At]	40S ribosomal protein uS10	-	-	-
EC [auth Au]	40S ribosomal protein S21	-	-	-
FC [auth Av]	Ribosomal protein S15a	-	-	-
GC [auth Aw]	40S ribosomal protein S23	-	-	-
HC [auth Ax]	40S ribosomal protein S24	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	ribosomal subunit intracellular organelle protein-containing complex intracellular anatomical structure organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
IC [auth Ay]	40S ribosomal protein S25	-	-	-
JC [auth Az]	60S ribosomal protein L41	-	-	-
KC [auth TA]	Translocon-associated protein subunit alpha	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle endoplasmic reticulum cytoplasm cellular anatomical entity intracellular membrane-bounded organelle endomembrane system organelle subcompartment membrane endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network organelle membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle endoplasmic reticulum cytoplasm cellular anatomical entity intracellular membrane-bounded organelle endomembrane system organelle subcompartment membrane endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network organelle membrane endoplasmic reticulum membrane
I [auth BF]	uL30,60S ribosomal protein L7	-	-	-
LC [auth TB]	Translocon-associated protein subunit beta	-	-	membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane
MC [auth TC]	Signal sequence receptor subunit 3	-	protein localization establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting localization within membrane protein localization to membrane establishment of localization protein targeting to membrane localization SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle cellular macromolecule localization macromolecule localization protein localization to organelle protein localization establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting localization within membrane protein localization to membrane establishment of localization protein targeting to membrane localization SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle cellular macromolecule localization macromolecule localization protein localization to organelle cotranslational protein targeting to membrane cellular process establishment of protein localization to endoplasmic reticulum protein localization to endoplasmic reticulum protein targeting to ER	membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane
NC [auth TD]	Translocon-associated protein subunit delta	-	-	membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
R [auth BO]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
R [auth BO]	IPR005822	Large ribosomal subunit protein uL13	Family
R [auth BO]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
R [auth BO]	IPR005755	Large ribosomal subunit protein uL13, eukaryotic/archaeal	Family
T [auth BQ]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
T [auth BQ]	IPR021132	Large ribosomal subunit protein eL18, conserved site	Conserved Site
T [auth BQ]	IPR000039	Large ribosomal subunit protein eL18	Family
T [auth BQ]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
U [auth BR]	IPR015972	Large ribosomal subunit protein eL19, domain 1	Homologous Superfamily
U [auth BR]	IPR039547	Large ribosomal subunit protein eL19	Family
U [auth BR]	IPR023638	Large ribosomal subunit protein eL19, conserved site	Conserved Site
U [auth BR]	IPR035970	Large ribosomal subunit protein eL19 superfamily	Homologous Superfamily
U [auth BR]	IPR000196	Large ribosomal subunit protein eL19 domain	Domain
U [auth BR]	IPR033935	Large ribosomal subunit protein eL19, eukaryotic	Domain
D [auth BA]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
D [auth BA]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
D [auth BA]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
D [auth BA]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
D [auth BA]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
D [auth BA]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
D [auth BA]	IPR002171	Large ribosomal subunit protein uL2	Family
D [auth BA]	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
D [auth BA]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
D [auth BA]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
D [auth BA]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
D [auth BA]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
D [auth BA]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
D [auth BA]	IPR002171	Large ribosomal subunit protein uL2	Family
OA [auth Bl]	IPR023626	Large ribosomal subunit protein eL39 domain superfamily	Homologous Superfamily
OA [auth Bl]	IPR000077	Large ribosomal subunit protein eL39	Family
OA [auth Bl]	IPR020083	Large ribosomal subunit protein eL39, conserved site	Conserved Site
PA [auth Bm]	IPR019956	Ubiquitin domain	Domain
PA [auth Bm]	IPR019954	Ubiquitin conserved site	Conserved Site
PA [auth Bm]	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
PA [auth Bm]	IPR000626	Ubiquitin-like domain	Domain
WA [auth SX]	IPR002208	SecY/SEC61-alpha family	Family
WA [auth SX]	IPR030659	SecY conserved site	Conserved Site
WA [auth SX]	IPR023201	SecY domain superfamily	Homologous Superfamily
WA [auth SX]	IPR019561	Translocon Sec61/SecY, plug domain	Domain
XA [auth SY]	IPR008158	Protein translocase SEC61 complex, gamma subunit	Family
XA [auth SY]	IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	Family
XA [auth SY]	IPR023391	Protein translocase SecE domain superfamily	Homologous Superfamily
YA [auth SZ]	IPR016482	Protein transport protein SecG/Sec61-beta/Sbh	Family
YA [auth SZ]	IPR030671	Protein transport Sec61-beta/Sbh	Family
EB [auth AE]	IPR038551	Ribosomal protein eS26 superfamily	Homologous Superfamily
EB [auth AE]	IPR000892	Small ribosomal subunit protein eS26	Family
EB [auth AE]	IPR047864	Ribosomal protein eS26, conserved site	Conserved Site
LB [auth Ab]	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
LB [auth Ab]	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
LB [auth Ab]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
LB [auth Ab]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
G [auth BD]	IPR005485	Large ribosomal subunit protein uL18 eukaryotic/archaeal	Family
G [auth BD]	IPR025607	Large ribosomal subunit protein uL18, C-terminal, eukaryotes	Domain
TB [auth Aj]	IPR037447	Small ribosomal subunit protein eS10	Family
TB [auth Aj]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
TB [auth Aj]	IPR005326	Plectin/eS10, N-terminal	Domain
HC [auth Ax]	IPR001976	Small ribosomal subunit protein eS24	Family
HC [auth Ax]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
HC [auth Ax]	IPR018098	Small ribosomal subunit protein eS24 conserved site	Conserved Site
KC [auth TA]	IPR005595	Translocon-associated protein (TRAP), alpha subunit	Family
LC [auth TB]	IPR008856	Translocon-associated protein subunit beta	Family
MC [auth TC]	IPR009779	Translocon-associated protein subunit gamma	Family
NC [auth TD]	IPR008855	Translocon-associated	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A [auth B5]	1MA	Parent Component: A
A [auth B5]	5MC	Parent Component: C
A [auth B5]	6MZ	Parent Component: A
A [auth B5]	A2M	Parent Component: A
A [auth B5]	OMC	Parent Component: C
A [auth B5]	OMG	Parent Component: G
A [auth B5]	OMU	Parent Component: U
A [auth B5]	PSU	Parent Component: U
A [auth B5]	UR3	Parent Component: U
A [auth B5]	UY1
N [auth BK]	UNK
C [auth B8]	OMG	Parent Component: G
C [auth B8]	PSU	Parent Component: U
DA [auth Ba]	V5N	Parent Component: HIS
EA [auth Bb]	MLZ	Parent Component: LYS RESID: AA0076 PSI-MOD : N6-methyl-L-lysine MOD:00085
D [auth BA]	V5N	Parent Component: HIS RESID: AA0076
PA [auth Bm]	M3L	Parent Component: LYS RESID: AA0076 , AA0074 PSI-MOD : N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083
QA [auth Bo]	MLZ	Parent Component: LYS RESID: AA0076 , AA0074 , AA0076 PSI-MOD : N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6-methyl-L-lysine MOD:00085
SA [auth Br]	SAC	Parent Component: SER RESID: AA0076 , AA0074 , AA0076
E [auth BB]	HIC	Parent Component: HIS RESID: AA0076 , AA0074 , AA0076 , AA0317 PSI-MOD : N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6-methyl-L-lysine MOD:00085 , 1'-methyl-L-histidine MOD:00322
ZA [auth A2]	4AC	RESID: AA0076 , AA0074 , AA0076 , AA0317
ZA [auth A2]	6MZ	Parent Component: A RESID: AA0076 , AA0074 , AA0076 , AA0317
ZA [auth A2]	A2M	Parent Component: A RESID: AA0076 , AA0074 , AA0076 , AA0317
ZA [auth A2]	B8N	RESID: AA0076 , AA0074 , AA0076 , AA0317
ZA [auth A2]	G7M	Parent Component: G RESID: AA0076 , AA0074 , AA0076 , AA0317
ZA [auth A2]	MA6	Parent Component: A RESID: AA0076 , AA0074 , AA0076 , AA0317
ZA [auth A2]	OMC	Parent Component: C RESID: AA0076 , AA0074 , AA0076 , AA0317
ZA [auth A2]	OMG	Parent Component: G RESID: AA0076 , AA0074 , AA0076 , AA0317
ZA [auth A2]	OMU	Parent Component: U RESID: AA0076 , AA0074 , AA0076 , AA0317
ZA [auth A2]	PSU	Parent Component: U RESID: AA0076 , AA0074 , AA0076 , AA0317
F [auth BC]	AYA	Parent Component: ALA RESID: AA0076 , AA0074 , AA0076 , AA0317
IB [auth AT]	5MC	Parent Component: C RESID: AA0076 , AA0074 , AA0076 , AA0317
IB [auth AT]	5MU	Parent Component: U RESID: AA0076 , AA0074 , AA0076 , AA0317
IB [auth AT]	PSU	Parent Component: U RESID: AA0076 , AA0074 , AA0076 , AA0317
JB [auth AZ]	SAC	Parent Component: SER RESID: AA0076 , AA0074 , AA0076 , AA0317
XB [auth An]	5F0	RESID: AA0076 , AA0074 , AA0076 , AA0317
BC [auth Ar]	SAC	Parent Component: SER RESID: AA0076 , AA0074 , AA0076 , AA0317
CC [auth As]	NMM	Parent Component: ARG RESID: AA0076 , AA0074 , AA0076 , AA0317
EC [auth Au]	AME	Parent Component: MET RESID: AA0076 , AA0074 , AA0076 , AA0317
GC [auth Aw]	HY3	Parent Component: PRO RESID: AA0076 , AA0074 , AA0076 , AA0317 , AA0029 PSI-MOD : N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6-methyl-L-lysine MOD:00085 , 1'-methyl-L-histidine MOD:00322 , 3-hydroxy-L-proline MOD:00038