Giardia ribosome in POST-T state, no E-site tRNA (A6)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| TB [auth Sg] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8107166 | 3000135 | SCOP2B (2022-06-29) |
| RB [auth Sd] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8107194 | 3000068 | SCOP2B (2022-06-29) |
| G [auth LG] | SCOP2B Superfamily | Ribosomal protein L39e | 8107108 | 3001756 | SCOP2B (2022-06-29) |
| PB [auth Sb] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8107170 | 3000210 | SCOP2B (2022-06-29) |
| OB [auth SY] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8107164 | 3000068 | SCOP2B (2022-06-29) |
| NB [auth SX] | SCOP2B Superfamily | Ribosomal protein S10 | 8107168 | 3001336 | SCOP2B (2022-06-29) |
| MB [auth SW] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8107538 | 3000034 | SCOP2B (2022-06-29) |
| LB [auth SV] | SCOP2B Superfamily | S13-like H2TH domain | 8107204 | 3000053 | SCOP2B (2022-06-29) |
| JB [auth ST] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8107184 | 3000100 | SCOP2B (2022-06-29) |
| HB [auth SQ] | SCOP2B Superfamily | Translational machinery components | 8107240 | 3000571 | SCOP2B (2022-06-29) |
| F [auth LF] | SCOP2B Superfamily | Translational machinery components | 8107236 | 3000571 | SCOP2B (2022-06-29) |
| BB [auth SJ] | SCOP2B Superfamily | Ribosomal protein S8 | 8107238 | 3000709 | SCOP2B (2022-06-29) |
| XA [auth SF] | SCOP2B Superfamily | Ribosomal protein S7 | 8107208 | 3000799 | SCOP2B (2022-06-29) |
| VA [auth SD] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8107200 | 3002166 | SCOP2B (2022-06-29) |
| SA | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8107178 | 3001397 | SCOP2B (2022-06-29) |
| QA [auth Ls] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8107202 | 3001320 | SCOP2B (2022-06-29) |
| PA [auth Lq] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8107192 | 3001320 | SCOP2B (2022-06-29) |
| HA [auth Lh] | SCOP2B Superfamily | Ribosomal protein L34e-like | 8107190 | 3002203 | SCOP2B (2022-06-29) |
| FA [auth Lf] | SCOP2B Superfamily | Ribosomal protein L32e | 8107188 | 3000982 | SCOP2B (2022-06-29) |
| DA [auth Ld] | SCOP2B Superfamily | L30e-like | 8107172 | 3001739 | SCOP2B (2022-06-29) |
| BA [auth Lb] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8107206 | 3001045 | SCOP2B (2022-06-29) |
| W [auth LW] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8107198 | 3000433 | SCOP2B (2022-06-29) |
| B [auth LB] | SCOP2B Superfamily | Translational proteins | 8107196 | 3000811 | SCOP2B (2022-06-29) |
| S [auth LS] | SCOP2B Superfamily | Ribosomal protein L19 (L19e) | 8107180 | 3000890 | SCOP2B (2022-06-29) |
| Q [auth LQ] | SCOP2B Superfamily | Ribosomal protein L22 | 8107176 | 3001078 | SCOP2B (2022-06-29) |
| O [auth LO] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8107174 | 3000210 | SCOP2B (2022-06-29) |
| L [auth LL] | SCOP2B Superfamily | RL5-like | 8107182 | 3001709 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth LI] | Cullin_AB | e8brmLI1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| H [auth LH] | Cullin_AB | e8brmLH1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| VB [auth Sj] | Cullin_AB | e8brmSj1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| UB [auth Sh] | Cullin_AB | e8brmSh1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| TB [auth Sg] | Cullin_AB | e8brmSg1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| SB [auth Se] | Cullin_AB | e8brmSe1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| RB [auth Sd] | Cullin_AB | e8brmSd1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| G [auth LG] | Cullin_AB | e8brmLG1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| QB [auth Sc] | Cullin_AB | e8brmSc1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| PB [auth Sb] | Cullin_AB | e8brmSb1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| OB [auth SY] | Cullin_AB | e8brmSY1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| NB [auth SX] | Cullin_AB | e8brmSX1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| MB [auth SW] | Cullin_AB | e8brmSW1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| LB [auth SV] | Cullin_AB | e8brmSV1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| KB [auth SU] | Cullin_AB | e8brmSU1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| JB [auth ST] | Cullin_AB | e8brmST1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| IB [auth SR] | Cullin_AB | e8brmSR1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| HB [auth SQ] | Cullin_AB | e8brmSQ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| F [auth LF] | Cullin_AB | e8brmLF1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| GB [auth SP] | Cullin_AB | e8brmSP1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| FB [auth SO] | Cullin_AB | e8brmSO1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| EB [auth SM] | Cullin_AB | e8brmSM1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| DB [auth SL] | Cullin_AB | e8brmSL1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| CB [auth SK] | Cullin_AB | e8brmSK1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| BB [auth SJ] | Cullin_AB | e8brmSJ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| AB [auth SI] | Cullin_AB | e8brmSI1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| ZA [auth SH] | Cullin_AB | e8brmSH1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| YA [auth SG] | Cullin_AB | e8brmSG1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| XA [auth SF] | Cullin_AB | e8brmSF1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| WA [auth SE] | Cullin_AB | e8brmSE1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| VA [auth SD] | Cullin_AB | e8brmSD1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| UA [auth SC] | Cullin_AB | e8brmSC1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| TA [auth SB] | Cullin_AB | e8brmSB1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| SA | Cullin_AB | e8brmSA1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| QA [auth Ls] | Cullin_AB | e8brmLs1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| PA [auth Lq] | Cullin_AB | e8brmLq1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| OA [auth Lp] | Cullin_AB | e8brmLp1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| NA [auth Lo] | Cullin_AB | e8brmLo1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| MA [auth Ln] | Cullin_AB | e8brmLn1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| LA [auth Ll] | Cullin_AB | e8brmLl1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| KA [auth Lk] | Cullin_AB | e8brmLk1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| IA [auth Li] | Cullin_AB | e8brmLi1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| HA [auth Lh] | Cullin_AB | e8brmLh1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| GA [auth Lg] | Cullin_AB | e8brmLg1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| FA [auth Lf] | Cullin_AB | e8brmLf1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| EA [auth Le] | Cullin_AB | e8brmLe1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| DA [auth Ld] | Cullin_AB | e8brmLd1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| CA [auth Lc] | Cullin_AB | e8brmLc1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| BA [auth Lb] | Cullin_AB | e8brmLb1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| AA [auth La] | Cullin_AB | e8brmLa1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| Z [auth LZ] | Cullin_AB | e8brmLZ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| Y [auth LY] | Cullin_AB | e8brmLY1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| X [auth LX] | Cullin_AB | e8brmLX1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| W [auth LW] | Cullin_AB | e8brmLW1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| V [auth LV] | Cullin_AB | e8brmLV1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| U [auth LU] | Cullin_AB | e8brmLU1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| T [auth LT] | Cullin_AB | e8brmLT1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| B [auth LB] | Cullin_AB | e8brmLB1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| R [auth LR] | Cullin_AB | e8brmLR1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| Q [auth LQ] | Cullin_AB | e8brmLQ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| P [auth LP] | Cullin_AB | e8brmLP1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| O [auth LO] | Cullin_AB | e8brmLO1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| N [auth LN] | Cullin_AB | e8brmLN1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| M [auth LM] | Cullin_AB | e8brmLM1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| L [auth LL] | Cullin_AB | e8brmLL1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| K [auth LK] | Cullin_AB | e8brmLK1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| J [auth LJ] | Cullin_AB | e8brmLJ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| A [auth LA] | Cullin_AB | e8brmLA1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth LI] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| I [auth LI] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| H [auth LH] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| G [auth LG] | PF00832 | Ribosomal L39 protein (Ribosomal_L39) | Ribosomal L39 protein | - | Family |
| G [auth LG] | PF01247 | Ribosomal protein L35Ae (Ribosomal_L35Ae) | Ribosomal protein L35Ae | This entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. | Domain |
| OB [auth SY] | PF01249 | Ribosomal protein S21e (Ribosomal_S21e) | Ribosomal protein S21e | - | Family |
| NB [auth SX] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| MB [auth SW] | PF01090 | Ribosomal protein S19e (Ribosomal_S19e) | Ribosomal protein S19e | - | Family |
| LB [auth SV] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| JB [auth ST] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| IB [auth SR] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| HB [auth SQ] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| F [auth LF] | PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family |
| F [auth LF] | PF14204 | Ribosomal L18 C-terminal region (Ribosomal_L18_c) | Ribosomal L18 C-terminal region | This domain is the C-terminal end of ribosomal L18/L5 proteins. | Domain |
| F [auth LF] | PF01655 | Ribosomal protein L32 (Ribosomal_L32e) | Ribosomal protein L32 | - | Family |
| GB [auth SP] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| FB [auth SO] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| EB [auth SM] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| EB [auth SM] | PF16205 | Ribosomal_S17 N-terminal (Ribosomal_S17_N) | Ribosomal_S17 N-terminal | - | Family |
| DB [auth SL] | PF03501 | Plectin/S10 domain (S10_plectin) | Plectin/S10 domain | This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. | Domain |
| CB [auth SK] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| CB [auth SK] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| BB [auth SJ] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| AB [auth SI] | PF01201 | Ribosomal protein S8e (Ribosomal_S8e) | Ribosomal protein S8e | - | Family |
| ZA [auth SH] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| ZA [auth SH] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| YA [auth SG] | PF01200 | Ribosomal protein S28e (Ribosomal_S28e) | Ribosomal protein S28e | Domain | |
| XA [auth SF] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| WA [auth SE] | PF01667 | Ribosomal protein S27 (Ribosomal_S27e) | Ribosomal protein S27 | - | Family |
| WA [auth SE] | PF00900 | Ribosomal family S4e (Ribosomal_S4e) | Ribosomal family S4e | - | Family |
| WA [auth SE] | PF16121 | 40S ribosomal protein S4 C-terminus (40S_S4_C) | 40S ribosomal protein S4 C-terminus | - | Family |
| WA [auth SE] | PF08071 | RS4NT (NUC023) domain (RS4NT) | RS4NT (NUC023) domain | This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. | Domain |
| UA [auth SC] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| TA [auth SB] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| TA [auth SB] | PF01282 | Ribosomal protein S24e (Ribosomal_S24e) | Ribosomal protein S24e | - | Family |
| TA [auth SB] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| D [auth LD] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| C [auth LC] | PF14374 | 60S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C) | 60S ribosomal protein L4 C-terminal domain | This family is found at the very C-terminal of 60 ribosomal L4 proteins. | Domain |
| C [auth LC] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| Z [auth LZ] | PF16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26) | Ribosomal proteins L26 eukaryotic, L24P archaeal | - | Family |
| Y [auth LY] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| X [auth LX] | PF01246 | Ribosomal protein L24e (Ribosomal_L24e) | Ribosomal protein L24e | Domain | |
| W [auth LW] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| V [auth LV] | PF01776 | Ribosomal L22e protein family (Ribosomal_L22e) | Ribosomal L22e protein family | - | Family |
| T [auth LT] | PF01775 | Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A) | Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A | This family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. | Domain |
| B [auth LB] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| S [auth LS] | PF01280 | Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e) | Ribosomal protein L19e, N-terminal domain | This domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. | Domain |
| S [auth LS] | PF25476 | Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C) | Ribosomal protein L19e, C-terminal domain | This domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. | Domain |
| S [auth LS] | PF01020 | Ribosomal L40e family (Ribosomal_L40e) | Ribosomal L40e family | Bovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. | Domain |
| R [auth LR] | PF17135 | Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18) | Ribosomal protein 60S L18 and 50S L18e | - | Family |
| Q [auth LQ] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| Q [auth LQ] | PF01780 | Ribosomal L37ae protein family (Ribosomal_L37ae) | Ribosomal L37ae protein family | - | Family |
| P [auth LP] | PF00935 | Ribosomal protein L44 (Ribosomal_L44) | Ribosomal protein L44 | - | Family |
| O [auth LO] | PF00827 | Ribosomal L15 (Ribosomal_L15e) | Ribosomal L15 | - | Family |
| N [auth LN] | PF01929 | Ribosomal protein L14 (Ribosomal_L14e) | Ribosomal protein L14 | - | Family |
| N [auth LN] | PF00687 | Ribosomal protein L1p/L10e family (Ribosomal_L1) | Ribosomal protein L1p/L10e family | This family includes prokaryotic L1 and eukaryotic L10. | Domain |
| L [auth LL] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| L [auth LL] | PF01781 | Ribosomal L38e protein family (Ribosomal_L38e) | Ribosomal L38e protein family | - | Family |
| L [auth LL] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| K [auth LK] | PF01907 | Ribosomal protein L37e (Ribosomal_L37e) | Ribosomal protein L37e | - | Family |
| J [auth LJ] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| J [auth LJ] | PF01158 | Ribosomal protein L36e (Ribosomal_L36e) | Ribosomal protein L36e | - | Family |
| A [auth LA] | PF01777 | Ribosomal L27e protein family (Ribosomal_L27e) | Ribosomal L27e protein family | - | Family |
| A [auth LA] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| A [auth LA] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |














