8BOZ | pdb_00008boz

structure of the Adherent-Invasive Escherichia coli Tle3/Tli3 T6SS effector/immunity complex

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth B], E [auth D], F, H, J, C [auth B], E [auth D], F, H, J, L, N, P	PF24316	T6SS Tli3 immunity protein (Tli3)	T6SS Tli3 immunity protein	This entry represents the type VI secretion system (T6SS) Tli3 immunity protein from adherent-invasive Escherichia coli and related proteins. Tli3 is an outer membrane lipoprotein and a cognate immunity protein of T6SS Tle3 phospholipase effector. Tl ...	This entry represents the type VI secretion system (T6SS) Tli3 immunity protein from adherent-invasive Escherichia coli and related proteins. Tli3 is an outer membrane lipoprotein and a cognate immunity protein of T6SS Tle3 phospholipase effector. Tli3 and Tle3 form a stable complex in which a loop of Tli3 inserts deeply in the Tle3 substrate-binding pocket and thus inhibiting its function [1]. Tli3 folds into an all-beta structure composed of three stacked beta-sheets, two of which are resembling a beta-sandwich while the third packs on its edge [1].	Domain
A, B [auth C], D [auth E], G, I, A, B [auth C], D [auth E], G, I, K, M, O	PF24322	T6SS Tle3 phospholipase effector domain (Tle3)	T6SS Tle3 phospholipase effector domain	This entry represents an alpha/beta domain found in the type VI secretion system (T6SS) Tle3 phospholipase effector from adherent-invasive Escherichia coli and related proteins. Tle3 has a phospholipase A1 activity and its toxicity is neutralised by ...	This entry represents an alpha/beta domain found in the type VI secretion system (T6SS) Tle3 phospholipase effector from adherent-invasive Escherichia coli and related proteins. Tle3 has a phospholipase A1 activity and its toxicity is neutralised by the cognate immunity protein Tli3. Tli3 and Tle3 form a stable complex in which a loop of Tli3 inserts deeply in the Tle3 substrate-binding pocket and thus inhibiting its function [1]. This Tle3 domain folds into a globular alpha/beta structure consisting of a central beta-sheet and alpha-helices packed on both sides. It contains the typical nucleophile-elbow motif and structurally resembles classical alpha/beta hydrolase fold but elaborated with a number of large loops.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth B], E [auth D], F, H, J, C [auth B], E [auth D], F, H, J, L, N, P	Lipoprotein	-	-	-
A, B [auth C], D [auth E], G, I, A, B [auth C], D [auth E], G, I, K, M, O	Transmembrane protein	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth B], E [auth D], F, H, J, C [auth B], E [auth D], F, H, J, L, N, P	IPR057562	Tli3-like domain	Domain
A, B [auth C], D [auth E], G, I, A, B [auth C], D [auth E], G, I, K, M, O	IPR056221	T6SS, Tle3 phospholipase effector, alpha/beta domain	Domain
A, B [auth C], D [auth E], G, I, A, B [auth C], D [auth E], G, I, K, M, O	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.