8BEM | pdb_00008bem

STE20-like serine/threonine-protein kinase (SLK) in complex with Tivozanib

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth G]	SCOP2B Superfamily	Protein kinase-like (PK-like)	8034645	3000066	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Protein kinase-like (PK-like)	8034645	3000066	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Protein kinase-like (PK-like)	8034645	3000066	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Protein kinase-like (PK-like)	8034645	3000066	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth G]	PAE	e8bemG1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PAE	ECOD (v294.1)
C [auth D]	PAE	e8bemD1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PAE	ECOD (v294.1)
B	PAE	e8bemB1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PAE	ECOD (v294.1)
A	PAE	e8bemA1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PAE	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth D], D [auth G]	PF00069	Protein kinase domain (Pkinase)	Protein kinase domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C [auth D], D [auth G]	STE20-like serine/threonine-protein kinase	catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding identical protein binding protein binding protein homodimerization activity protein dimerization activity cell adhesion molecule binding cadherin binding protein serine/threonine kinase activity	regulation of cellular process regulation of cellular component organization cell-substrate junction assembly cellular component organization cellular component biogenesis cell adhesion cellular component assembly cell junction assembly regulation of cell-substrate junction organization cellular component organization or biogenesis focal adhesion assembly regulation of biological process regulation of cell-substrate adhesion regulation of cell adhesion regulation of cellular process regulation of cellular component organization cell-substrate junction assembly cellular component organization cellular component biogenesis cell adhesion cellular component assembly cell junction assembly regulation of cell-substrate junction organization cellular component organization or biogenesis focal adhesion assembly regulation of biological process regulation of cell-substrate adhesion regulation of cell adhesion biological regulation cell-substrate adhesion regulation of cellular component biogenesis regulation of cell junction assembly cell junction organization cell-matrix adhesion regulation of cell-matrix adhesion cell-substrate junction organization cellular process regulation of focal adhesion assembly regulation of cell-substrate junction assembly apoptotic process cell death programmed cell death regulation of apoptotic process regulation of programmed cell death regulation of cell motility regulation of locomotion regulation of cell migration cell migration cell motility locomotion protein phosphorylation protein autophosphorylation phosphorylation primary metabolic process macromolecule modification phosphate-containing compound metabolic process metabolic process protein metabolic process macromolecule metabolic process protein modification process phosphorus metabolic process organelle organization microtubule cytoskeleton organization microtubule-based process cytoplasmic microtubule organization supramolecular fiber organization cytoskeleton organization cellular response to stimulus response to stimulus signaling signal transduction intracellular signal transduction cell communication	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol cell leading edge perinuclear region of cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth D], D [auth G]	IPR017441	Protein kinase, ATP binding site	Binding Site
A, B, C [auth D], D [auth G]	IPR000719	Protein kinase domain	Domain
A, B, C [auth D], D [auth G]	IPR051585	STE20 Subfamily Serine/Threonine Kinases	Family
A, B, C [auth D], D [auth G]	IPR022165	Polo kinase kinase	Family
A, B, C [auth D], D [auth G]	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B, C [auth D], D [auth G]	IPR001943	UVR domain	Domain
A, B, C [auth D], D [auth G]	IPR008271	Serine/threonine-protein kinase, active site	Active Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C [auth D], D [auth G]	Pharos: Q9H2G2	lung adenocarcinoma non-small cell lung carcinoma lung cancer malignant mesothelioma neuroblastoma Organic Mental Disorders, Substance-Induced ovarian serous adenocarcinoma amyotrophic lateral sclerosis brain glioma psoriasis cutaneous melanoma spina bifida drug dependence substance dependence glioblastoma lung adenocarcinoma non-small cell lung carcinoma lung cancer malignant mesothelioma neuroblastoma Organic Mental Disorders, Substance-Induced ovarian serous adenocarcinoma amyotrophic lateral sclerosis brain glioma psoriasis cutaneous melanoma spina bifida drug dependence substance dependence glioblastoma hypertensive disorder large cell medulloblastoma malignant ependymoma melanoma ovarian cancer pancreatic adenocarcinoma astrocytic tumor primitive neuroectodermal tumor renal cell carcinoma dermatomyositis substance abuse heart disease thyroid gland carcinoma interstitial lung disease malignant glioma myopathy oligodendroglioma ovarian carcinoma pancreatic intraductal papillary-mucinous neoplasm progressive supranuclear palsy chronic obstructive pulmonary disease skin basal cell carcinoma substance-related disorder hydrolethalus syndrome uterine corpus leiomyoma invasive ductal breast carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.