Cryo-EM structure of cytochrome bd oxidase from C. glutamicum
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth B] | F_UNCLASSIFIED | e8b4oB2 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: F_UNCLASSIFIED | ECOD (1.6) |
| A [auth B] | Cyt_bd_oxida_II_1st | e8b4oB1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: Cyt_bd_oxida_II_1st | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B [auth A] | PF01654 | Cytochrome bd terminal oxidase subunit I (Cyt_bd_oxida_I) | Cytochrome bd terminal oxidase subunit I | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| B [auth A] | Cytochrome BD ubiquinol oxidase subunit I |
| ||
| A [auth B] | Cytochrome bd-type quinol oxidase subunit II | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| B [auth A] | IPR002585 | Cytochrome ubiquinol oxidase subunit 1 | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Electron transport chain complex IV (cytochrome c oxidase) | Cytochrome BD oxidase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |














