Annotations: 8ALZ

Cryo-EM structure of ASCC3 in complex with ASC1

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	F5_F8_type_C	e8alzB1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
B	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (utative)
B	2.60.40.150	Mainly Beta	Sandwich	Immunoglobulin-like	C2 domain	CATH (utative)
B	1.10.3380.10	Mainly Alpha	Orthogonal Bundle	Sec63 N-terminal domain-like fold	Sec63 N-terminal domain-like domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF02889	Sec63 Brl domain (Sec63)	Sec63 Brl domain	-	Family
B	PF23445	Winged Helix-turn-helix domain (WHD_SNRNP200)	Winged Helix-turn-helix domain	This entry represents a winged Helix-Turn-Helix domain found in a variety of helicase enzymes.	Domain
B	PF00270	DEAD/DEAH box helicase (DEAD)	DEAD/DEAH box helicase	Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...	Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.	Domain
B	PF00271	Helicase conserved C-terminal domain (Helicase_C)	Helicase conserved C-terminal domain	The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.	Domain
A	PF06221	Putative zinc finger motif, C2HC5-type (zf-C2HC5)	Putative zinc finger motif, C2HC5-type	This zinc finger appears to be common in activating signal cointegrator 1/thyroid receptor interacting protein 4.	Domain
A	PF04266	ASCH domain (ASCH)	ASCH domain	The ASCH domain adopts a beta-barrel fold similar to the Pfam:PF01472 domain [1]. It is thought to function as an RNA-binding domain during coactivation, RNA-processing and possibly during prokaryotic translation regulation [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Activating signal cointegrator 1 complex subunit 3	RNA binding binding nucleic acid binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding RNA binding binding nucleic acid binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity nucleic acid conformation isomerase activity isomerase activity DNA helicase activity catalytic activity, acting on a nucleic acid helicase activity 3'-5' DNA helicase activity ATP-dependent activity, acting on DNA catalytic activity, acting on DNA macromolecular conformation isomerase activity	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cellular component disassembly ribosome disassembly translation gene expression protein biosynthetic process macromolecule biosynthetic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cellular component disassembly ribosome disassembly translation gene expression protein biosynthetic process macromolecule biosynthetic process cellular component organization organelle organization biosynthetic process organelle disassembly translational elongation cytoplasmic translation cytoplasmic translational elongation protein metabolic process cellular component organization or biogenesis rescue of stalled cytosolic ribosome cellular response to stimulus response to stimulus DNA alkylation repair cellular response to stress DNA damage response response to stress DNA repair catabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process ribosome-associated ubiquitin-dependent protein catabolic process	cellular anatomical structure membrane protein-containing complex catalytic complex DNA repair complex membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule cellular anatomical structure membrane protein-containing complex catalytic complex DNA repair complex membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule intracellular organelle nuclear body nucleoplasm organelle lumen organelle membraneless organelle supramolecular complex nuclear ribonucleoprotein granule nuclear lumen cytoplasm cytosol cytosolic ribosome ribosome RQC-trigger complex
A	Activating signal cointegrator 1	protein binding binding enzyme binding protease binding transcription coactivator activity transcription regulator activity transcription coregulator activity ubiquitin-like protein ligase binding kinase binding protein kinase binding histone acetyltransferase binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding nuclear receptor binding protein binding binding enzyme binding protease binding transcription coactivator activity transcription regulator activity transcription coregulator activity ubiquitin-like protein ligase binding kinase binding protein kinase binding histone acetyltransferase binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding nuclear receptor binding DNA-binding transcription factor binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding nuclear estrogen receptor binding	cellular component disassembly ribosome disassembly primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process cellular component organization organelle organization biosynthetic process organelle disassembly translational elongation cytoplasmic translation metabolic process cellular component disassembly ribosome disassembly primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process cellular component organization organelle organization biosynthetic process organelle disassembly translational elongation cytoplasmic translation metabolic process cellular process cytoplasmic translational elongation protein metabolic process macromolecule metabolic process cellular component organization or biogenesis rescue of stalled cytosolic ribosome catabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process ribosome-associated ubiquitin-dependent protein catabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process cellular response to stimulus intracellular receptor signaling pathway response to stimulus response to lipid signaling hormone-mediated signaling pathway intracellular signal transduction cell communication cellular response to endogenous stimulus response to hormone response to steroid hormone signal transduction nuclear receptor-mediated steroid hormone signaling pathway cellular response to steroid hormone stimulus steroid hormone receptor signaling pathway cellular response to hormone stimulus response to endogenous stimulus estrogen receptor signaling pathway cellular response to chemical stimulus response to chemical cellular response to lipid nuclear receptor-mediated signaling pathway positive regulation of DNA-templated transcription positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process developmental process regulation of developmental process cellular developmental process regulation of cell differentiation muscle structure development cell differentiation anatomical structure development regulation of myoblast differentiation myoblast differentiation	intracellular organelle centrosome microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton cytoplasm cytosol membrane-bounded organelle nucleus intracellular organelle centrosome microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-containing complex neuromuscular junction synapse cell junction RQC-trigger complex nuclear body

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR058856	ASCC3-like, N-terminal domain	Domain
B	IPR004179	Sec63 domain	Domain
B	IPR003593	AAA+ ATPase domain	Domain
B	IPR014756	Immunoglobulin E-set	Homologous Superfamily
B	IPR011545	DEAD/DEAH-box helicase domain	Domain
B	IPR057842	MER3 helicase-like, winged helix domain	Domain
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B	IPR050474	Helicase Hel308/SKI2-like	Family
B	IPR001650	Helicase, C-terminal domain-like	Domain
B	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
B	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
B	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
B	IPR035892	C2 domain superfamily	Homologous Superfamily
A	IPR015947	PUA-like superfamily	Homologous Superfamily
A	IPR056994	Activating signal cointegrator 1, N-terminal	Domain
A	IPR009349	TRIP4/RQT4, C2HC5-type zinc finger	Domain
A	IPR056993	Activating signal cointegrator 1, third domain	Domain
A	IPR007374	ASCH domain	Domain
A	IPR039128	Activating signal cointegrator 1-like	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	: Q8N3C0	intellectual disability attention deficit hyperactivity disorder, inattentive type Crohn disease glioblastoma lung adenocarcinoma Mental deficiency oligodendroglioma primitive neuroectodermal tumor atypical teratoid rhabdoid tumor diabetes mellitus IgA glomerulonephritis malignant glioma ovarian cancer bipolar disorder endogenous depression intellectual disability attention deficit hyperactivity disorder, inattentive type Crohn disease glioblastoma lung adenocarcinoma Mental deficiency oligodendroglioma primitive neuroectodermal tumor atypical teratoid rhabdoid tumor diabetes mellitus IgA glomerulonephritis malignant glioma ovarian cancer bipolar disorder endogenous depression malignant mesothelioma non-small cell lung carcinoma pilocytic astrocytoma
A	: Q15650	congenital muscular dystrophy-respiratory failure-skin abnormalities-joint hyperlaxity syndrome spinal muscular atrophy with congenital bone fractures 1 Alzheimer disease glioblastoma ovarian cancer astrocytic tumor diabetes mellitus medulloblastoma congenital muscular dystrophy endogenous depression neurodegenerative disease

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.