8AJV | pdb_00008ajv

Crystal structure of the Q65N mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa crystallized in the presence of K+ cations

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H [auth III]	GFP	e8ajvIII1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.2)
G [auth HHH]	GFP	e8ajvHHH1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.2)
F [auth GGG]	GFP	e8ajvGGG1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.2)
E [auth FFF]	GFP	e8ajvFFF1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.2)
D [auth DDD]	GFP	e8ajvDDD1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.2)
C [auth CCC]	GFP	e8ajvCCC1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.2)
B [auth BBB]	GFP	e8ajvBBB1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.2)
A [auth AAA]	GFP	e8ajvAAA1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], F [auth GGG], G [auth HHH], H [auth III]	PF05221	S-adenosyl-L-homocysteine hydrolase (AdoHcyase)	S-adenosyl-L-homocysteine hydrolase		Domain
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], F [auth GGG], G [auth HHH], H [auth III]	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain (AdoHcyase_NAD)	S-adenosyl-L-homocysteine hydrolase, NAD binding domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], F [auth GGG], G [auth HHH], H [auth III]	Adenosylhomocysteinase	hydrolase activity hydrolase activity, acting on carbon-sulfur bonds adenosylhomocysteinase activity catalytic activity	L-methionine cycle S-adenosylmethionine metabolic process sulfur compound metabolic process metabolic process cellular process oxoacid metabolic process sulfur amino acid metabolic process amino acid metabolic process organic acid biosynthetic process organic acid metabolic process alpha-amino acid metabolic process carboxylic acid biosynthetic process non-proteinogenic amino acid metabolic process small molecule metabolic process L-methionine cycle S-adenosylmethionine metabolic process sulfur compound metabolic process metabolic process cellular process oxoacid metabolic process sulfur amino acid metabolic process amino acid metabolic process organic acid biosynthetic process organic acid metabolic process alpha-amino acid metabolic process carboxylic acid biosynthetic process non-proteinogenic amino acid metabolic process small molecule metabolic process non-proteinogenic amino acid biosynthetic process homocysteine metabolic process small molecule biosynthetic process carboxylic acid metabolic process L-amino acid biosynthetic process primary metabolic process L-amino acid metabolic process amino acid biosynthetic process sulfur compound biosynthetic process biosynthetic process serine family amino acid biosynthetic process L-homocysteine biosynthetic process sulfur amino acid biosynthetic process alpha-amino acid biosynthetic process one-carbon metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], F [auth GGG], G [auth HHH], H [auth III]	IPR015878	S-adenosyl-L-homocysteine hydrolase, NAD binding domain	Domain
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], F [auth GGG], G [auth HHH], H [auth III]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], F [auth GGG], G [auth HHH], H [auth III]	IPR020082	S-adenosyl-L-homocysteine hydrolase, conserved site	Conserved Site
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], F [auth GGG], G [auth HHH], H [auth III]	IPR042172	Adenosylhomocysteinase-like superfamily	Homologous Superfamily
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth FFF], F [auth GGG], G [auth HHH], H [auth III]	IPR000043	Adenosylhomocysteinase-like	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.