8AIY | pdb_00008aiy

STRUCTURE OF THE LECB LECTIN FROM PSEUDOMONAS AERUGINOSA STRAIN PAO1 IN COMPLEX WITH N-(beta-L-Fucopyranosyl)-biphenyl-3-carboxamide (4i)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth AAA]	SCOP2B Superfamily	Calcium-mediated lectin	8042940	3001391	SCOP2B (2022-06-29)
B [auth BBB]	SCOP2B Superfamily	Calcium-mediated lectin	8042940	3001391	SCOP2B (2022-06-29)
D [auth DDD]	SCOP2B Superfamily	Calcium-mediated lectin	8042940	3001391	SCOP2B (2022-06-29)
C [auth CCC]	SCOP2B Superfamily	Calcium-mediated lectin	8042940	3001391	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth AAA]	F5_F8_type_C	e8aiyAAA1	A: alpha bundles	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (develop294)
B [auth BBB]	F5_F8_type_C	e8aiyBBB1	A: alpha bundles	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (develop294)
D [auth DDD]	F5_F8_type_C	e8aiyDDD1	A: alpha bundles	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (develop294)
C [auth CCC]	F5_F8_type_C	e8aiyCCC1	A: alpha bundles	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD]	PF07472	Fucose-binding lectin II (PA-IIL) (PA-IIL)	Fucose-binding lectin II (PA-IIL)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD]	Fucose-binding lectin PA-IIL	binding carbohydrate binding cation binding ion binding metal ion binding small molecule binding	cell aggregation biofilm formation biological process involved in intraspecies interaction between organisms single-species biofilm formation cellular process aggregation of unicellular organisms	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD]	IPR036684	Calcium-mediated lectin superfamily	Homologous Superfamily
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD]	IPR010907	Calcium-mediated lectin	Domain
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD]	IPR016927	Lectin, sugar-binding	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.