8AIX | pdb_00008aix

Cryo-EM structure of crescentin filaments (wildtype, C2 symmetry and large box)

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X [auth S]	GFP	e8aixS1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.1)
W [auth O]	GFP	e8aixO1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.1)
V [auth T]	GFP	e8aixT1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.1)
O [auth P]	GFP	e8aixP1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.1)
L [auth I]	GFP	e8aixI1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.1)
K [auth C]	GFP	e8aixC1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.1)
J	GFP	e8aixJ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.1)
C [auth D]	GFP	e8aixD1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GFP	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, D [auth G], E [auth H], F [auth K], A, B, D [auth G], E [auth H], F [auth K], G [auth L], H [auth M], I [auth N], M [auth E], N [auth F], P [auth Q], Q [auth R], R [auth U], S [auth V], T [auth W], U [auth X]	PF19220	Crescentin, rod domain (Rod_CreS)	Crescentin, rod domain	-	Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth D], J, K [auth C], L [auth I], O [auth P], C [auth D], J, K [auth C], L [auth I], O [auth P], V [auth T], W [auth O], X [auth S]	Crescentin-specific megabody MB13	hydrolase activity, acting on glycosyl bonds alpha,alpha-trehalase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity trehalase activity catalytic activity glucosidase activity cation binding ion binding binding metal ion binding small molecule binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process carbohydrate metabolic process trehalose catabolic process catabolic process trehalose metabolic process oligosaccharide catabolic process oligosaccharide metabolic process carbohydrate catabolic process primary metabolic process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process carbohydrate metabolic process trehalose catabolic process catabolic process trehalose metabolic process oligosaccharide catabolic process oligosaccharide metabolic process carbohydrate catabolic process primary metabolic process disaccharide metabolic process metabolic process disaccharide catabolic process	protein-containing complex catalytic complex glucosidase complex
A, B, D [auth G], E [auth H], F [auth K], A, B, D [auth G], E [auth H], F [auth K], G [auth L], H [auth M], I [auth N], M [auth E], N [auth F], P [auth Q], Q [auth R], R [auth U], S [auth V], T [auth W], U [auth X]	Crescentin	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth D], J, K [auth C], L [auth I], O [auth P], C [auth D], J, K [auth C], L [auth I], O [auth P], V [auth T], W [auth O], X [auth S]	IPR012341	Six-hairpin glycosidase-like superfamily	Homologous Superfamily
C [auth D], J, K [auth C], L [auth I], O [auth P], C [auth D], J, K [auth C], L [auth I], O [auth P], V [auth T], W [auth O], X [auth S]	IPR048450	Glucosidase YgjK, N-terminal domain	Domain
C [auth D], J, K [auth C], L [auth I], O [auth P], C [auth D], J, K [auth C], L [auth I], O [auth P], V [auth T], W [auth O], X [auth S]	IPR054491	Mannosylglycerate hydrolase MGH1-like, glycoside hydrolase domain	Domain
C [auth D], J, K [auth C], L [auth I], O [auth P], C [auth D], J, K [auth C], L [auth I], O [auth P], V [auth T], W [auth O], X [auth S]	IPR001661	Glycoside hydrolase, family 37	Family
C [auth D], J, K [auth C], L [auth I], O [auth P], C [auth D], J, K [auth C], L [auth I], O [auth P], V [auth T], W [auth O], X [auth S]	IPR008928	Six-hairpin glycosidase superfamily	Homologous Superfamily
A, B, D [auth G], E [auth H], F [auth K], A, B, D [auth G], E [auth H], F [auth K], G [auth L], H [auth M], I [auth N], M [auth E], N [auth F], P [auth Q], Q [auth R], R [auth U], S [auth V], T [auth W], U [auth X]	IPR043652	Crescentin, coiled-coil domain	Domain
A, B, D [auth G], E [auth H], F [auth K], A, B, D [auth G], E [auth H], F [auth K], G [auth L], H [auth M], I [auth N], M [auth E], N [auth F], P [auth Q], Q [auth R], R [auth U], S [auth V], T [auth W], U [auth X]	IPR057274	Crescentin, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.