8AFI
GABARAP in complex with LIR motif of HsATG3
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ubiquitin-like | 8040431 | 3000157 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Ubiquitin-like | 8040431 | 3000157 | SCOP2B (2022-06-29) |
K [auth E] | SCOP2B Superfamily | Ubiquitin-like | 8040431 | 3000157 | SCOP2B (2022-06-29) |
L [auth G] | SCOP2B Superfamily | Ubiquitin-like | 8040431 | 3000157 | SCOP2B (2022-06-29) |
M [auth I] | SCOP2B Superfamily | Ubiquitin-like | 8040431 | 3000157 | SCOP2B (2022-06-29) |
N [auth K] | SCOP2B Superfamily | Ubiquitin-like | 8040431 | 3000157 | SCOP2B (2022-06-29) |
O [auth M] | SCOP2B Superfamily | Ubiquitin-like | 8040431 | 3000157 | SCOP2B (2022-06-29) |
P [auth O] | SCOP2B Superfamily | Ubiquitin-like | 8040431 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02991 | e8afiA1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF02991 | ECOD (1.6) |
B [auth C] | PF02991 | e8afiC1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF02991 | ECOD (1.6) |
K [auth E] | PF02991 | e8afiE1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF02991 | ECOD (1.6) |
L [auth G] | PF02991 | e8afiG1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF02991 | ECOD (1.6) |
M [auth I] | PF02991 | e8afiI1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF02991 | ECOD (1.6) |
N [auth K] | PF02991 | e8afiK1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF02991 | ECOD (1.6) |
O [auth M] | PF02991 | e8afiM1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF02991 | ECOD (1.6) |
P [auth O] | PF02991 | e8afiO1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF02991 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02991 | Autophagy protein Atg8 ubiquitin like (ATG8) | Autophagy protein Atg8 ubiquitin like | Light chain 3 is proposed to function primarily as a subunit of microtubule associated proteins 1A and 1B and that its expression may regulate microtubule binding activity [1]. Autophagy is generally known as a process involved in the degradation of ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004241 | Autophagy protein Atg8 ubiquitin-like | Family | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR007135 | Ubiquitin-like-conjugating enzyme Atg3/Atg10 | Family | |
IPR046962 | Autophagy-related protein 3 | Family |