8AAS
Crystal structure of the Pyrococcus abyssi RPA trimerization core bound to poly-dT20 ssDNA
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e8aasA1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e8aasA2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e8aasC1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08646 | Replication factor-A C terminal domain (Rep_fac-A_C) | Replication factor-A C terminal domain | - | Family | |
PF01336 | OB-fold nucleic acid binding domain (tRNA_anti-codon) | OB-fold nucleic acid binding domain | This family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an a ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR013955 | Replication factor A, C-terminal | Domain | |
IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR040260 | Replication factor A protein-like | Family | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |