Cryo-EM structure of the indirubin-bound Hsp90-XAP2-AHR complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | GHKL (Gyrase, Hsp90, Histidine Kinase, MutL) domain-like | 8070952 | 3000091 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | GHKL (Gyrase, Hsp90, Histidine Kinase, MutL) domain-like | 8070952 | 3000091 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | HSP90_1st | e7zubA3 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: HSP90_1st | ECOD (1.6) |
| A | HATPase_c | e7zubA2 | A: a+b two layers | X: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like | H: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (From Topology) | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: HATPase_c | ECOD (1.6) |
| A | HSP90_2nd | e7zubA1 | A: a/b three-layered sandwiches | X: HSP90 C-terminal a/b domain (From Topology) | H: HSP90 C-terminal a/b domain (From Topology) | T: HSP90 C-terminal a/b domain | F: HSP90_2nd | ECOD (1.6) |
| A | HSP90_3rd | e7zubA4 | A: mixed a+b and a/b | X: Zincin-like | H: HSP90 C-terminal domain (C-terminal part of Pfam 00183) (From Topology) | T: HSP90 C-terminal domain (C-terminal part of Pfam 00183) | F: HSP90_3rd | ECOD (1.6) |
| B | HSP90_1st | e7zubB4 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: HSP90_1st | ECOD (1.6) |
| B | HATPase_c | e7zubB3 | A: a+b two layers | X: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like | H: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (From Topology) | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: HATPase_c | ECOD (1.6) |
| B | HSP90_2nd | e7zubB2 | A: a/b three-layered sandwiches | X: HSP90 C-terminal a/b domain (From Topology) | H: HSP90 C-terminal a/b domain (From Topology) | T: HSP90 C-terminal a/b domain | F: HSP90_2nd | ECOD (1.6) |
| B | HSP90_3rd | e7zubB1 | A: mixed a+b and a/b | X: Zincin-like | H: HSP90 C-terminal domain (C-terminal part of Pfam 00183) (From Topology) | T: HSP90 C-terminal domain (C-terminal part of Pfam 00183) | F: HSP90_3rd | ECOD (1.6) |
| D | PAS_11 | e7zubD1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PAS_11 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.10.50.40 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (utative) |
| C | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00183 | Hsp90 protein (HSP90) | Hsp90 protein | - | Family | |
| PF13589 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3) | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90. | Domain | |
| PF08447 | PAS fold (PAS_3) | PAS fold | The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [4]. The PAS fold appears in archaea, eubacteria and eukarya. | Domain | |
| PF23322 | AH receptor-interacting protein, N-terminal FKBP-type PPIase (PPIase_AIP) | AH receptor-interacting protein, N-terminal FKBP-type PPIase | This is the FKBP-type peptidyl-prolyl cis/trans isomerase (PPIase) domain of human AH receptor-interacting protein (AIP) and similar animal proteins. AIP may play a positive role in AHR-mediated (aromatic hydrocarbon receptor) signalling. This domain ... | Domain |














