Tail tip of siphophage T5 : full complex after interaction with its bacterial receptor FhuA
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| S [auth Y] | EUF07531 | e7zn2Y2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07531 | ECOD (1.6) |
| S [auth Y] | EUF07532 | e7zn2Y1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07532 | ECOD (1.6) |
| R [auth X] | EUF07531 | e7zn2X2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07531 | ECOD (1.6) |
| R [auth X] | EUF07532 | e7zn2X1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07532 | ECOD (1.6) |
| L [auth a] | EUF07531 | e7zn2a2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07531 | ECOD (1.6) |
| L [auth a] | EUF07532 | e7zn2a1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07532 | ECOD (1.6) |
| JA [auth Z] | EUF07531 | e7zn2Z1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07531 | ECOD (1.6) |
| JA [auth Z] | EUF07532 | e7zn2Z2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07532 | ECOD (1.6) |
| IA [auth V] | EUF07531 | e7zn2V1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07531 | ECOD (1.6) |
| IA [auth V] | EUF07532 | e7zn2V2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07532 | ECOD (1.6) |
| AA [auth W] | EUF07531 | e7zn2W2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07531 | ECOD (1.6) |
| AA [auth W] | EUF07532 | e7zn2W1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: EUF07532 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF21430 | Distal tail protein pb9, B domain (DTP-pb9_B-dom) | Distal tail protein pb9, B domain | This entry includes phage distal tail proteins which form a hexameric ring located at the tail tube end, such as pb9 from bacteriophage T5 [1]. pb9 consists of two domains, A and B. This entry represents domain B which adopts an OB fold and is insert ... | Domain | |
| PF24169 | Straight fiber protein PB4 first Fn3-like domain (Fn3-I_PB4) | Straight fiber protein PB4 first Fn3-like domain | This entry represents the N-terminal Fn3-like domain of the Straight fiber protein PB4 found in T5-like phages. PB4 along with PB3, forms the central straight fiber, bearing the receptor binding protein PB5 at its C terminus [1]. Upon PB5 binding to ... | Domain | |
| PF24168 | Straight fiber protein PB4 spike domain (PB4_spike) | Straight fiber protein PB4 spike domain | This entry represents the Straight fiber protein PB4 spike found in T5-like bacteriophages. PB4 along with PB3, forms the central straight fiber, bearing the receptor binding protein PB5 at its C terminus [1]. Upon PB5 binding to the host receptor Fh ... | Domain | |
| PF02368 | Bacterial Ig-like domain (group 2) (Big_2) | Bacterial Ig-like domain (group 2) | This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins. | Domain | |
| PF24170 | Straight fiber protein PB4 second Fn3-like domain (Fn3-II_PB4) | Straight fiber protein PB4 second Fn3-like domain | This entry represents the second Fn3-like domain of the Straight fiber protein PB4 found in T5-like phages. PB4 along with PB3, forms the central straight fiber, bearing the receptor binding protein PB5 at its C terminus [1]. Upon PB5 binding to the ... | Domain | |
| PF21424 | Distal tail protein pb9, A domain C-terminal (DTP-pb9_A-dom_C) | Distal tail protein pb9, A domain C-terminal | This entry includes phage distal tail proteins which form a hexameric ring located at the tail tube end, such as pb9 from bacteriophage T5 [1]. pb9 consists of two domains, A and B. Domain A adopts a split barrel fold and includes residues 1 to 82-1 ... | Domain | |
| PF24171 | Straight fiber protein PB4 third Fn3-like domain (Fn3-III_PB4) | Straight fiber protein PB4 third Fn3-like domain | This entry represents the third Fn3-like domain of the Straight fiber protein PB4 found in T5-like phages. PB4 along with PB3, forms the central straight fiber, bearing the receptor binding protein PB5 at its C terminus [1]. Upon PB5 binding to the h ... | Domain | |
| PF21425 | Distal tail protein pb9, A domain, N-terminal (DTP-pb9_A-dom_N) | Distal tail protein pb9, A domain, N-terminal | This entry includes phage distal tail proteins which form a hexameric ring located at the tail tube end, such as pb9 from bacteriophage T5 [1]. pb9 consists of two domains, A and B. Domain A adopts a split barrel fold and includes residues 1 to 82-17 ... | Domain | |
| PF21430 | Distal tail protein pb9, B domain (DTP-pb9_B-dom) | Distal tail protein pb9, B domain | This entry includes phage distal tail proteins which form a hexameric ring located at the tail tube end, such as pb9 from bacteriophage T5 [1]. pb9 consists of two domains, A and B. This entry represents domain B which adopts an OB fold and is insert ... | Domain | |
| PF21424 | Distal tail protein pb9, A domain C-terminal (DTP-pb9_A-dom_C) | Distal tail protein pb9, A domain C-terminal | This entry includes phage distal tail proteins which form a hexameric ring located at the tail tube end, such as pb9 from bacteriophage T5 [1]. pb9 consists of two domains, A and B. Domain A adopts a split barrel fold and includes residues 1 to 82-1 ... | Domain | |
| PF21425 | Distal tail protein pb9, A domain, N-terminal (DTP-pb9_A-dom_N) | Distal tail protein pb9, A domain, N-terminal | This entry includes phage distal tail proteins which form a hexameric ring located at the tail tube end, such as pb9 from bacteriophage T5 [1]. pb9 consists of two domains, A and B. Domain A adopts a split barrel fold and includes residues 1 to 82-17 ... | Domain | |
| K [auth I], Q [auth H], Z [auth G] | PF24169 | Straight fiber protein PB4 first Fn3-like domain (Fn3-I_PB4) | Straight fiber protein PB4 first Fn3-like domain | This entry represents the N-terminal Fn3-like domain of the Straight fiber protein PB4 found in T5-like phages. PB4 along with PB3, forms the central straight fiber, bearing the receptor binding protein PB5 at its C terminus [1]. Upon PB5 binding to ... | Domain |
| K [auth I], Q [auth H], Z [auth G] | PF24170 | Straight fiber protein PB4 second Fn3-like domain (Fn3-II_PB4) | Straight fiber protein PB4 second Fn3-like domain | This entry represents the second Fn3-like domain of the Straight fiber protein PB4 found in T5-like phages. PB4 along with PB3, forms the central straight fiber, bearing the receptor binding protein PB5 at its C terminus [1]. Upon PB5 binding to the ... | Domain |
| K [auth I], Q [auth H], Z [auth G] | PF23779 | Bacteriophage Baseplate Tube Protein Family (Baseplate_Tube_p140) | Bacteriophage Baseplate Tube Protein Family | - | Family |
| K [auth I], Q [auth H], Z [auth G] | PF24171 | Straight fiber protein PB4 third Fn3-like domain (Fn3-III_PB4) | Straight fiber protein PB4 third Fn3-like domain | This entry represents the third Fn3-like domain of the Straight fiber protein PB4 found in T5-like phages. PB4 along with PB3, forms the central straight fiber, bearing the receptor binding protein PB5 at its C terminus [1]. Upon PB5 binding to the h ... | Domain |
| PF23926 | LtfC-like, beta-sandwich domain (LtfC) | LtfC-like, beta-sandwich domain | This entry, previously known as DUF7264, represents a domain found in the Minor tail protein Gp6, Collar protein p132, Lateral tail fiber protein C (LtfC) and related phage proteins. This domain folds into a beta-sandwich fold with and extended beta- ... | Domain | |














