7Z8F
Composite structure of dynein-dynactin-BICDR on microtubules
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
FA [auth k] | SCOP2B Superfamily | Roadblock/LC7 domain-like | 8033463 | 3001810 | SCOP2B (2022-06-29) |
GA [auth l] | SCOP2B Superfamily | Roadblock/LC7 domain-like | 8033463 | 3001810 | SCOP2B (2022-06-29) |
NA [auth s] | SCOP2B Superfamily | Roadblock/LC7 domain-like | 8033463 | 3001810 | SCOP2B (2022-06-29) |
OA [auth t] | SCOP2B Superfamily | Roadblock/LC7 domain-like | 8033463 | 3001810 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Subunits of heterodimeric actin filament capping protein Capz | 8077311 | 3001499 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00022 | e7z8fA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
B | PF00022 | e7z8fB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
C | PF00022 | e7z8fC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
D | PF00022 | e7z8fD2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
E | PF00022 | e7z8fE2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
F | PF00022 | e7z8fF1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
G | PF00022 | e7z8fG1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
I | PF00022 | e7z8fI1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
V | PF21711 | e7z8fV1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF21711 | ECOD (1.6) |
PA [auth w] | F_UNCLASSIFIED | e7z8fw1 | A: alpha bundles | X: YscO-like | H: CT398 helical hairpin (From Topology) | T: CT398 helical hairpin | F: F_UNCLASSIFIED | ECOD (1.6) |
QA [auth x] | F_UNCLASSIFIED | e7z8fx1 | A: alpha bundles | X: YscO-like | H: CT398 helical hairpin (From Topology) | T: CT398 helical hairpin | F: F_UNCLASSIFIED | ECOD (1.6) |
W | F_UNCLASSIFIED | e7z8fW1 | A: alpha bundles | X: YscO-like | H: CT398 helical hairpin (From Topology) | T: CT398 helical hairpin | F: F_UNCLASSIFIED | ECOD (1.6) |
BA [auth g] | F_UNCLASSIFIED | e7z8fg1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
JA [auth o] | F_UNCLASSIFIED | e7z8fo1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
CA [auth h] | F_UNCLASSIFIED | e7z8fh1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
KA [auth p] | F_UNCLASSIFIED | e7z8fp1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
DA [auth i] | PF05783 | e7z8fi1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF05783 | ECOD (1.6) |
LA [auth q] | PF05783 | e7z8fq1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF05783 | ECOD (1.6) |
MA [auth r] | PF05783 | e7z8fr1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF05783 | ECOD (1.6) |
FA [auth k] | PF03259 | e7z8fk1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: PF03259 | ECOD (1.6) |
GA [auth l] | PF03259 | e7z8fl1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: PF03259 | ECOD (1.6) |
NA [auth s] | PF03259 | e7z8fs1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: PF03259 | ECOD (1.6) |
OA [auth t] | PF03259 | e7z8ft1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: PF03259 | ECOD (1.6) |
H | PF00022 | e7z8fH2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
J | PF00022 | e7z8fJ2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
K | PF01267 | e7z8fK1 | A: alpha bundles | X: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz (From Topology) | H: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz (From Topology) | T: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | F: PF01267 | ECOD (1.6) |
K | PF01267 | e7z8fK3 | A: a+b two layers | X: a+b domain in Capz (From Topology) | H: a+b domain in Capz (From Topology) | T: a+b domain in Capz | F: PF01267 | ECOD (1.6) |
K | PF01267 | e7z8fK2 | A: few secondary structure elements | X: beta-barrel domain in Capz (From Topology) | H: beta-barrel domain in Capz (From Topology) | T: beta-barrel domain in Capz | F: PF01267 | ECOD (1.6) |
L | PF01115 | e7z8fL1 | A: alpha bundles | X: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz (From Topology) | H: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz (From Topology) | T: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | F: PF01115 | ECOD (1.6) |
L | PF01115 | e7z8fL3 | A: a+b two layers | X: a+b domain in Capz (From Topology) | H: a+b domain in Capz (From Topology) | T: a+b domain in Capz | F: PF01115 | ECOD (1.6) |
L | PF01115 | e7z8fL2 | A: few secondary structure elements | X: beta-barrel domain in Capz (From Topology) | H: beta-barrel domain in Capz (From Topology) | T: beta-barrel domain in Capz | F: PF01115 | ECOD (1.6) |
U | F_UNCLASSIFIED | e7z8fU1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00022 | Actin (Actin) | Actin | - | Family | |
PF21711 | Dynactin subunit 5 (DCTN5) | Dynactin subunit 5 | - | Repeat | |
PF05502 | Dynactin p62 family (Dynactin_p62) | Dynactin p62 family | - | Family | |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF18198 | Dynein heavy chain AAA lid domain (AAA_lid_11) | Dynein heavy chain AAA lid domain | This family represents the AAA lid domain found neat the C-terminal region of dynein heavy chain. | Domain |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF12775 | P-loop containing dynein motor region (AAA_7) | P-loop containing dynein motor region | This domain is found in human cytoplasmic dynein-2 proteins. Cytoplasmic dynein-2 (dynein-2) performs intraflagellar transport and is associated with human skeletal ciliophathies. Dyneins share a conserved motor domain that couples cycles of ATP hydr ... | Domain |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF12774 | Hydrolytic ATP binding site of dynein motor region (AAA_6) | Hydrolytic ATP binding site of dynein motor region | This domain is found in human cytoplasmic dynein-2 proteins. Cytoplasmic dynein-2 (dynein-2) performs intraflagellar transport and is associated with human skeletal ciliopathies. Dyneins share a conserved motor domain that couples cycles of ATP hydro ... | Domain |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF08385 | Dynein heavy chain, N-terminal region 1 (DHC_N1) | Dynein heavy chain, N-terminal region 1 | - | Family |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF12781 | ATP-binding dynein motor region (AAA_9) | ATP-binding dynein motor region | This domain is found in human cytoplasmic dynein-2 proteins. Cytoplasmic dynein-2 (dynein-2) performs intraflagellar transport and is associated with human skeletal ciliopathies. Dyneins share a conserved motor domain that couples cycles of ATP hydro ... | Domain |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF18199 | Dynein heavy chain C-terminal domain (Dynein_C) | Dynein heavy chain C-terminal domain | This family represents the C-terminal domain of dynein heavy chain. This domain is a complex structure comprising six alpha-helices and an incomplete six-stranded antiparallel beta-barrel. The shape of this domain is distinctively flat, spreading ove ... | Domain |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF12780 | P-loop containing dynein motor region D4 (AAA_8) | P-loop containing dynein motor region D4 | The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures describ ... | Domain |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF17852 | Dynein heavy chain AAA lid domain (Dynein_AAA_lid) | Dynein heavy chain AAA lid domain | This entry corresponds to the extension domain of AAA domain 5 in the dynein heavy chain [1]. This domain is composed of 8 alpha helices [1]. | Domain |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF08393 | Dynein heavy chain, N-terminal region 2 (DHC_N2) | Dynein heavy chain, N-terminal region 2 | - | Family |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF03028 | Dynein heavy chain region D6 P-loop domain (Dynein_heavy) | Dynein heavy chain region D6 P-loop domain | This family represents the C-terminal region of dynein heavy chain. The chain also contains ATPase activity and microtubule binding ability and acts as a motor for the movement of organelles and vesicles along microtubules. Dynein is also involved i ... | Domain |
AA [auth f], HA [auth m], IA [auth n], Z [auth e] | PF12777 | Microtubule-binding stalk of dynein motor (MT) | Microtubule-binding stalk of dynein motor | the 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures describ ... | Domain |
BA [auth g], CA [auth h], JA [auth o], KA [auth p] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
DA [auth i], EA [auth j], LA [auth q], MA [auth r] | PF05783 | Dynein light intermediate chain (DLIC) (DLIC) | Dynein light intermediate chain (DLIC) | - | Family |
FA [auth k], GA [auth l], NA [auth s], OA [auth t] | PF03259 | Roadblock/LC7 domain (Robl_LC7) | Roadblock/LC7 domain | This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ... | Domain |
PF00022 | Actin (Actin) | Actin | - | Family | |
PF00022 | Actin (Actin) | Actin | - | Family | |
PF01267 | F-actin capping protein alpha subunit (F-actin_cap_A) | F-actin capping protein alpha subunit | - | Family | |
PF01115 | F-actin capping protein, beta subunit (F_actin_cap_B) | F-actin capping protein, beta subunit | - | Family | |
PF04912 | Dynamitin (Dynamitin) | Dynamitin | - | Family | |
PF07426 | Dynactin subunit p22 (Dynactin_p22) | Dynactin subunit p22 | - | Family | |