7Y3F | pdb_00007y3f

Structure of the Anabaena PSI-monomer-IsiA supercomplex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth J]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8094669 3000824 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8094713 3000813 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyElectron transport accessory proteins 8093812 3000325 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPhotosystem I subunit PsaD 8094737 3000951 SCOP2B (2022-06-29)
CSCOP2B Superfamily4Fe-4S ferredoxins 8093786 3000020 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8094389 3000850 SCOP2B (2022-06-29)
J [auth M]SCOP2B SuperfamilySubunit XII of photosystem I reaction centre, PsaM 8094801 3000829 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8094435 3000850 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth J]e7y3fJ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
G [auth I]e7y3fI1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
Fe7y3fF1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
Ee7y3fE1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
De7y3fD1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
Ce7y3fC1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
Be7y3fB1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
P [auth 5]e7y3f51 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
O [auth 4]e7y3f41 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
L [auth 1]e7y3f11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
K [auth X]e7y3fX1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
J [auth M]e7y3fM1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)
Ae7y3fA1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: FAD_binding_4F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth J]PF01701Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ)Photosystem I reaction centre subunit IX / PsaJ- Family
G [auth I]PF00796Photosystem I reaction centre subunit VIII (PSI_8)Photosystem I reaction centre subunit VIII- Family
PF02507Photosystem I reaction centre subunit III (PSI_PsaF)Photosystem I reaction centre subunit III- Family
PF02427Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE)Photosystem I reaction centre subunit IV / PsaEPsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1]. Domain
PF02531PsaD (PsaD)PsaD- Family
PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
O [auth 4],
P [auth 5]
PF00421Photosystem II protein (PSII)Photosystem II protein- Family
J [auth M]PF07465Photosystem I protein M (PsaM) (PsaM)Photosystem I protein M (PsaM)- Family
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth K]Unknown---
H [auth J]Photosystem I reaction center subunit IX-
G [auth I]Photosystem I reaction center subunit VIII-
Photosystem I reaction center subunit III-
Photosystem I reaction center subunit IV-
Photosystem I reaction center subunit II-
Photosystem I iron-sulfur center
Photosystem I P700 chlorophyll a apoprotein A2 1
O [auth 4],
P [auth 5]
Iron stress-induced chlorophyll-binding protein
M [auth 2],
N [auth 3],
Q [auth 6]
IsiA---
L [auth 1]Photosystem I reaction center subunit XI- - -
K [auth X]Photosystem I 4.8 kDa protein-
J [auth M]PsaM-
Photosystem I P700 chlorophyll a apoprotein A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
H [auth J]IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
H [auth J]IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
G [auth I]IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
G [auth I]IPR001302Photosystem I reaction centre subunit VIIIFamily
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
IPR003685Photosystem I PsaDFamily
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR050157Photosystem I iron-sulfur centerFamily
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR017491Photosystem I protein PsaCFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR006244Photosystem I PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
O [auth 4],
P [auth 5]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
O [auth 4],
P [auth 5]
IPR000932Photosystem antenna protein-likeFamily
K [auth X]IPR036243Photosystem I PsaX superfamilyHomologous Superfamily
K [auth X]IPR012986Photosystem I PsaXFamily
J [auth M]IPR010010Photosystem I PsaM, reaction centreFamily
J [auth M]IPR037279Photosystem I PsaM, reaction centre superfamilyHomologous Superfamily
IPR006243Photosystem I PsaAFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage