7Y1C | pdb_00007y1c

CryoEM structure of Klebsiella phage Kp9 tail complex applied with C6 symmetry

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth X]	TRAPP	e7y1cX1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
C [auth W]	Peptidase_S9, Peptidase_S15	e7y1cW1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Peptidase_S9, Peptidase_S15	ECOD (v294.1)
A	MFS_1	e7y1cA01	A: a/b three-layered sandwiches	X: Rossmann-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: MFS_1	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F [auth e], G [auth f], H [auth g]	phage type I tail fiber	-	virion attachment to host cell biological process involved in interspecies interaction between organisms receptor-mediated virion attachment to host cell adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host adhesion receptor-mediated virion attachment to host cell biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated disruption of host anatomical structure symbiont-mediated disruption of host cell envelope symbiont-mediated disruption of host cellular anatomical structure symbiont entry into host cell via disruption of host cell envelope virion attachment to host cell biological process involved in interspecies interaction between organisms receptor-mediated virion attachment to host cell adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host adhesion receptor-mediated virion attachment to host cell biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated disruption of host anatomical structure symbiont-mediated disruption of host cell envelope symbiont-mediated disruption of host cellular anatomical structure symbiont entry into host cell via disruption of host cell envelope symbiont entry into host cell symbiont entry into host disruption of anatomical structure in another organism symbiont entry into host cell via disruption of host cell glycocalyx	virus tail virion component
E [auth Y]	phage tail tubular protein B	-	-	-
C [auth W], D [auth X]	phage tail tubular protein A	-	-	-
A, B [auth L]	phage connector protein	-	virion assembly viral process viral life cycle viral genome packaging viral DNA genome packaging symbiont genome ejection through host cell envelope biological process involved in interspecies interaction between organisms symbiont entry into host cell symbiont entry into host symbiont genome ejection through host cell envelope, short tail mechanism biological process involved in interaction with host biological process involved in symbiotic interaction	protein-containing complex viral capsid virion component viral portal complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F [auth e], G [auth f], H [auth g]	IPR012334	Pectin lyase fold	Homologous Superfamily
F [auth e], G [auth f], H [auth g]	IPR005604	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Domain
F [auth e], G [auth f], H [auth g]	IPR011050	Pectin lyase fold/virulence factor	Homologous Superfamily
E [auth Y]	IPR058003	Tail tubular protein gp12	Family
C [auth W], D [auth X]	IPR033767	Tail tubular protein Gp11	Family
A, B [auth L]	IPR038995	Portal protein, Caudovirales	Family
A, B [auth L]	IPR020991	Head-to-tail connector protein, podovirus-type	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.