LysR-family transcriptional regulator RipR effector binding domain with its effector, 3-phenylpropionic acid
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth C] | F_UNCLASSIFIED | e7xroC2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: F_UNCLASSIFIED | ECOD (1.6) |
| A [auth B] | F_UNCLASSIFIED | e7xroB2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth B], B [auth C] | PF03466 | LysR substrate binding domain (LysR_substrate) | LysR substrate binding domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth B], B [auth C] | RipR | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth B], B [auth C] | IPR005119 | LysR, substrate-binding | Domain |
| A [auth B], B [auth C] | IPR000847 | LysR, HTH, N-terminal domain | Domain |
| A [auth B], B [auth C] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| A [auth B], B [auth C] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
| A [auth B], B [auth C] | IPR037410 | HTH-type transcriptional regulator BudR, PBP2 domain | Domain |
