Crystal structure of IsdB linker-NEAT2 bound to a nanobody (VHH)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | TRAPP | e7xliB1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: TRAPP | ECOD (v294.1) |
| A | TRAPP | e7xliA1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: TRAPP | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| Heavy Chain | IGHV1 | - | fur-regulated protein b | SAbDab (2026-03-27) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| VHH6 nanobody | - | - | - | |
| Iron-regulated surface determinant protein B | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR005877 | YSIRK Gram-positive signal peptide | Domain | |
| IPR050436 | Iron-regulated surface determinant protein A | Family | |
| IPR006635 | NEAT domain | Domain | |
| IPR048652 | Iron-regulated surface determinant protein H/B, linker domain | Domain | |
| IPR019929 | Iron-regulated surface determinant protein IsdB | Family | |
| IPR019931 | LPXTG cell wall anchor motif | Conserved Site | |
| IPR037250 | NEAT domain superfamily | Homologous Superfamily |














