7X34 | pdb_00007x34

Cryo-EM structure of RNC-RAC complex in presence of Ssb from S. cerevisiae 2

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth C]	SCOP2B Superfamily	RAC head domain-like	8052372	3002109	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth C]	RAC_head_1	e7x34C1	A: alpha bundles	X: C-terminal Pdr1-activating domain of J-protein Zuo1 (From Topology)	H: C-terminal Pdr1-activating domain of J-protein Zuo1 (From Topology)	T: C-terminal Pdr1-activating domain of J-protein Zuo1	F: RAC_head_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth C]	1.10.8.840	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C]	PF16717	Ribosome-associated complex head domain (RAC_head)	Ribosome-associated complex head domain	The RAC head domain is involved in ribosome binding [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C]	Zuotin	DNA binding binding nucleic acid binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding transcription coactivator activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity protein binding Hsp70 protein binding protein-folding chaperone binding DNA binding binding nucleic acid binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding transcription coactivator activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity protein binding Hsp70 protein binding protein-folding chaperone binding heat shock protein binding	primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein folding biosynthetic process 'de novo' cotranslational protein folding metabolic process cellular process protein metabolic process macromolecule metabolic process 'de novo' protein folding biological regulation regulation of biological quality primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein folding biosynthetic process 'de novo' cotranslational protein folding metabolic process cellular process protein metabolic process macromolecule metabolic process 'de novo' protein folding biological regulation regulation of biological quality regulation of translational fidelity translation protein biosynthetic process translational elongation translational frameshifting establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport transport nuclear transport ribosomal subunit export from nucleus intracellular transport establishment of localization cellular component biogenesis localization ribosome biogenesis organelle localization establishment of localization in cell cellular component organization or biogenesis nuclear export ribosome localization RNA metabolic process rRNA processing nucleobase-containing compound biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process RNA processing rRNA metabolic process cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling signal transduction intracellular signal transduction cell communication	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen organelle lumen membraneless organelle nuclear lumen protein-containing complex protein folding chaperone complex intracellular protein-containing complex cytosol ribosome
B [auth 3]	RNA (130-mer)	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C]	IPR054076	Zuotin-like, zuotin homology domain	Domain
A [auth C]	IPR018253	DnaJ domain, conserved site	Conserved Site
A [auth C]	IPR032003	Ribosome-associated complex head domain	Domain
A [auth C]	IPR036869	Chaperone J-domain superfamily	Homologous Superfamily
A [auth C]	IPR001623	DnaJ domain	Domain
A [auth C]	IPR044634	J-protein Zuotin/DnaJC2	Family
A [auth C]	IPR042569	Ribosome-associated complex head domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.