7VM0 | pdb_00007vm0

Crystal structure of YojK from B.subtilis in complex with UDP


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRibosomal_L2e7vm0B1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L2ECOD (develop294)
ARibosomal_L2e7vm0A1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L2ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.2000 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycogen Phosphorylase BCATH (utative)
A3.40.50.2000 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycogen Phosphorylase BCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF06722Erythromycin biosynthesis protein CIII-like, C-terminal domain (EryCIII-like_C)Erythromycin biosynthesis protein CIII-like, C-terminal domainThis domain is found at the C-terminal of Erythromycin biosynthesis protein CIII (EryCIII) from Saccharopolyspora erythraea and similar proteins found in bacteria and eukaryotes. This protein is organised into two domains, both of them with a Rossman ...This domain is found at the C-terminal of Erythromycin biosynthesis protein CIII (EryCIII) from Saccharopolyspora erythraea and similar proteins found in bacteria and eukaryotes. This protein is organised into two domains, both of them with a Rossmann-like alpha/beta fold. The C-terminal domain contains the nucleotide disphospho-sugar (NDP-sugar) binding site [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Glycosyl transferase family 1 - -