7VGS | pdb_00007vgs

SARS-CoV-2 M protein dimer (short form) in complex with YN7717_9 Fab


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FFKBP_Ce7vgsF1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: FKBP_CECOD (develop294)
C [auth D]FKBP_Ce7vgsD1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: FKBP_CECOD (develop294)
EFKBP_Ce7vgsE1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: FKBP_CECOD (develop294)
B [auth C]FKBP_Ce7vgsC1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: FKBP_CECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
C [auth D]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
E2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B [auth C]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth D],
F
Heavy ChainIGHV1 -membrane proteinSAbDab (2026-03-20)
B [auth C],
E
Light ChainIGKV3 Kappamembrane proteinSAbDab (2026-03-20)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
D [auth B]
PF01635Coronavirus M matrix/glycoprotein (CoV_M)Coronavirus M matrix/glycoprotein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
D [auth B]
Membrane protein
C [auth D],
F
YN7717_9 Fab heavy chain---
B [auth C],
E
YN7717_9 Fab light chain---

Membrane Protein Annotation: PDBTM PDBTM Database Homepage