7VGR | pdb_00007vgr

SARS-CoV-2 M protein dimer (long form) in complex with YN7756_1 Fab


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth F]FKBP_Ce7vgrF1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: FKBP_CECOD (v294.1)
B [auth D]FKBP_Ce7vgrD1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: FKBP_CECOD (v294.1)
C [auth E]FKBP_Ce7vgrE1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: FKBP_CECOD (v294.1)
A [auth C]FKBP_Ce7vgrC1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: FKBP_CECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D [auth F]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B [auth D]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
C [auth E]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
A [auth C]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth D],
D [auth F]
Heavy ChainIGHV1 -membrane proteinSAbDab (2026-03-27)
A [auth C],
C [auth E]
Light ChainIGKV3 Kappamembrane proteinSAbDab (2026-03-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth A],
F [auth B]
PF01635Coronavirus M matrix/glycoprotein (CoV_M)Coronavirus M matrix/glycoprotein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth A],
F [auth B]
Membrane protein
B [auth D],
D [auth F]
YN7756_1 Fab heavy chain---
A [auth C],
C [auth E]
YN7756_1 Fab light chain---