Annotations: 7VEB

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Z	SCOP2B Superfamily	Phycobilisome linker domain-like	8052323	3002104	SCOP2B (2022-06-29)
Z	SCOP2B Superfamily	Phycobilisome linker domain-like	8052322	3002104	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Globin-like	8032280	3000554	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Globin-like	8032279	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
AA [auth a]	PBS_linker_poly	e7veba1	A: alpha arrays	X: PBS linker domain of phycobilisome linker polypeptide (From Topology)	H: PBS linker domain of phycobilisome linker polypeptide (From Topology)	T: PBS linker domain of phycobilisome linker polypeptide	F: PBS_linker_poly	ECOD (1.6)
Z	PBS_linker_poly	e7vebZ1	A: alpha arrays	X: PBS linker domain of phycobilisome linker polypeptide (From Topology)	H: PBS linker domain of phycobilisome linker polypeptide (From Topology)	T: PBS linker domain of phycobilisome linker polypeptide	F: PBS_linker_poly	ECOD (1.6)
Z	CpcD	e7vebZ2	A: a+b two layers	X: Allophycocyanin linker chain (domain) (From Topology)	H: Allophycocyanin linker chain (domain) (From Topology)	T: Allophycocyanin linker chain (domain)	F: CpcD	ECOD (1.6)
Y	CpcD	e7vebY1	A: a+b two layers	X: Allophycocyanin linker chain (domain) (From Topology)	H: Allophycocyanin linker chain (domain) (From Topology)	T: Allophycocyanin linker chain (domain)	F: CpcD	ECOD (1.6)
X	Phycobilisome	e7vebX1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
V	Phycobilisome	e7vebV1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
T	Phycobilisome	e7vebT1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
R	Phycobilisome	e7vebR1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
P	Phycobilisome	e7vebP1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
N	Phycobilisome	e7vebN1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
L	Phycobilisome	e7vebL1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
J	Phycobilisome	e7vebJ1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
H	Phycobilisome	e7vebH1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
F	Phycobilisome	e7vebF1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
D	Phycobilisome	e7vebD1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
B	Phycobilisome	e7vebB1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
W	Phycobilisome	e7vebW1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
U	Phycobilisome	e7vebU1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
S	Phycobilisome	e7vebS1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
Q	Phycobilisome	e7vebQ1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
O	Phycobilisome	e7vebO1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
M	Phycobilisome	e7vebM1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
K	Phycobilisome	e7vebK1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
I	Phycobilisome	e7vebI1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
G	Phycobilisome	e7vebG1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
E	Phycobilisome	e7vebE1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
C	Phycobilisome	e7vebC1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
A	Phycobilisome	e7vebA1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
Z	PF00427	Phycobilisome Linker polypeptide (PBS_linker_poly)	Phycobilisome Linker polypeptide	-	Family
Z	PF01383	CpcD/allophycocyanin linker domain (CpcD)	CpcD/allophycocyanin linker domain		Domain
Y	PF01383	CpcD/allophycocyanin linker domain (CpcD)	CpcD/allophycocyanin linker domain		Domain
B, D, F, H, J B, D, F, H, J, L, N, P, R, T, V, X	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
A, C, E, G, I A, C, E, G, I, K, M, O, Q, S, U, W	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
A, C, E, G, I A, C, E, G, I, K, M, O, Q, S, U, W	PF00427	Phycobilisome Linker polypeptide (PBS_linker_poly)	Phycobilisome Linker polypeptide	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth a]	Phycobilisome rod-core linker polypeptide CpcG2	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
Z	Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
Y	Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
B, D, F, H, J B, D, F, H, J, L, N, P, R, T, V, X	C-phycocyanin beta subunit	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
A, C, E, G, I A, C, E, G, I, K, M, O, Q, S, U, W	C-phycocyanin alpha subunit	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth a]	IPR001297	Phycobilisome linker domain	Domain
AA [auth a]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
Z	IPR016470	Phycobilisome linker protein	Family
Z	IPR008213	CpcD-like domain	Domain
Z	IPR001297	Phycobilisome linker domain	Domain
Z	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
Y	IPR008213	CpcD-like domain	Domain
B, D, F, H, J B, D, F, H, J, L, N, P, R, T, V, X	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P, R, T, V, X	IPR006247	Phycocyanin, beta subunit	Family
B, D, F, H, J B, D, F, H, J, L, N, P, R, T, V, X	IPR009050	Globin-like superfamily	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P, R, T, V, X	IPR012128	Phycobilisome, alpha/beta subunit	Family
A, C, E, G, I A, C, E, G, I, K, M, O, Q, S, U, W	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
A, C, E, G, I A, C, E, G, I, K, M, O, Q, S, U, W	IPR006246	Phycocyanin, alpha subunit	Family
A, C, E, G, I A, C, E, G, I, K, M, O, Q, S, U, W	IPR009050	Globin-like superfamily	Homologous Superfamily
A, C, E, G, I A, C, E, G, I, K, M, O, Q, S, U, W	IPR012128	Phycobilisome, alpha/beta subunit	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B, D, F, H, J B, D, F, H, J, L, N, P, R, T, V, X	MEN	Parent Component: ASN RESID: AA0070 PSI-MOD : N4-methyl-L-asparagine MOD:00079

7VEB | pdb_00007veb

Phycocyanin rod structure of cyanobacterial phycobilisome

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Protein Modification Annotation

Prepare Data

Validate Data

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Phycocyanin rod structure of cyanobacterial phycobilisome

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Protein Modification Annotation

7VEB | pdb_00007veb