7VCV | pdb_00007vcv

Human p97 single hexamer conformer I with ATPgammaS bound

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth E]Aminotran_3e7vcvE1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Aminotran_3ECOD (v294.1)
DAminotran_3e7vcvD1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Aminotran_3ECOD (v294.1)
E [auth C]Aminotran_3e7vcvC1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Aminotran_3ECOD (v294.1)
F [auth B]Aminotran_3e7vcvB1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Aminotran_3ECOD (v294.1)
B [auth F]Aminotran_3e7vcvF1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Aminotran_3ECOD (v294.1)
AAminotran_3e7vcvA1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Aminotran_3ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth E]3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
C [auth E]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
C [auth E]1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
C [auth E]6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
D3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
D3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
D1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
D6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
E [auth C]3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
E [auth C]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
E [auth C]1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
E [auth C]6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
F [auth B]3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
F [auth B]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
F [auth B]1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
F [auth B]6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
B [auth F]3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
B [auth F]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
B [auth F]1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
B [auth F]6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
A3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
A3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
A1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
A6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02933Cell division protein 48 (CDC48), domain 2 (CDC48_2)Cell division protein 48 (CDC48), domain 2This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ...This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the C-terminus. The VAT-N domain found in AAA ATPases Pfam:PF00004 is a substrate 185-residue recognition domain [1].
Domain
PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
PF02359Cell division protein 48 (CDC48), N-terminal domain (CDC48_N)Cell division protein 48 (CDC48), N-terminal domainThis domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ...This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the N-terminus. The VAT-N domain found in AAA ATPases Pfam:PF00004 is a substrate 185-residue recognition domain [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Transitional endoplasmic reticulum ATPase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR003959ATPase, AAA-type, coreDomain
IPR005938AAA ATPase, CDC48 familyFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR029067CDC48 domain 2-like superfamilyHomologous Superfamily
IPR003338CDC48, N-terminal subdomainDomain
IPR004201CDC48, domain 2Domain
IPR009010Aspartate decarboxylase-like domain superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR041569AAA ATPase, AAA+ lid domainDomain
IPR050168AAA ATPase domain-containing proteinFamily
IPR003960ATPase, AAA-type, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
Pharos:  P55072