7UOT
Native Lassa glycoprotein in complex with neutralizing antibodies 8.9F and 37.2D
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Lassa virus GP1 subunit receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | Lassa virus GP1 subunit receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
I [auth C] | SCOP2B Superfamily | Lassa virus GP1 subunit receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00798 | e7uotA1 | A: a+b complex topology | X: Envelope glycoprotein GP1 (From Topology) | H: Envelope glycoprotein GP1 (From Topology) | T: Envelope glycoprotein GP1 | F: PF00798 | ECOD (1.6) |
E [auth B] | PF00798 | e7uotB1 | A: a+b complex topology | X: Envelope glycoprotein GP1 (From Topology) | H: Envelope glycoprotein GP1 (From Topology) | T: Envelope glycoprotein GP1 | F: PF00798 | ECOD (1.6) |
I [auth C] | PF00798 | e7uotC1 | A: a+b complex topology | X: Envelope glycoprotein GP1 (From Topology) | H: Envelope glycoprotein GP1 (From Topology) | T: Envelope glycoprotein GP1 | F: PF00798 | ECOD (1.6) |
B [auth a] | PF00798 | e7uota1 | A: a+b complex topology | X: Arenavirus glycoprotein GP2 (From Topology) | H: Arenavirus glycoprotein GP2 (From Topology) | T: Arenavirus glycoprotein GP2 | F: PF00798 | ECOD (1.6) |
F [auth b] | PF00798 | e7uotb1 | A: a+b complex topology | X: Arenavirus glycoprotein GP2 (From Topology) | H: Arenavirus glycoprotein GP2 (From Topology) | T: Arenavirus glycoprotein GP2 | F: PF00798 | ECOD (1.6) |
J [auth c] | PF00798 | e7uotc1 | A: a+b complex topology | X: Arenavirus glycoprotein GP2 (From Topology) | H: Arenavirus glycoprotein GP2 (From Topology) | T: Arenavirus glycoprotein GP2 | F: PF00798 | ECOD (1.6) |
C [auth T] | PF07686 | e7uotT1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
G [auth P] | PF07686 | e7uotP1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
K [auth R] | PF07686 | e7uotR1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D [auth S] | PF07686 | e7uotS1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
H [auth O] | PF07686 | e7uotO1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
L [auth Q] | PF07686 | e7uotQ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
M [auth H] | PF07686 | e7uotH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
N [auth L] | PF07686 | e7uotL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
C [auth T], G [auth P], K [auth R] | Light Chain | IGKV3 | Kappa | - | SAbDab (2024-05-31) |
D [auth S], H [auth O], L [auth Q] | Heavy Chain | IGHV1 | - | - | SAbDab (2024-05-31) |
M [auth H] | Heavy Chain | IGHV4 | - | glycoprotein g2 | glycoprotein g2 | glycoprotein g2 | SAbDab (2024-05-31) |
N [auth L] | Light Chain | IGLV2 | Lambda | glycoprotein g2 | glycoprotein g2 | glycoprotein g2 | SAbDab (2024-05-31) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, E [auth B], I [auth C] | PF00798 | Arenavirus glycoprotein (Arena_glycoprot) | Arenavirus glycoprotein | - | Family |
B [auth a], F [auth b], J [auth c] | PF00798 | Arenavirus glycoprotein (Arena_glycoprot) | Arenavirus glycoprotein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, E [auth B], I [auth C] | IPR043015 | Arenavirus glycoprotein, zinc binding domain | Homologous Superfamily |
A, E [auth B], I [auth C] | IPR001535 | Arenavirus glycoprotein | Family |
B [auth a], F [auth b], J [auth c] | IPR043015 | Arenavirus glycoprotein, zinc binding domain | Homologous Superfamily |
B [auth a], F [auth b], J [auth c] | IPR001535 | Arenavirus glycoprotein | Family |