7UDQ | pdb_00007udq

Crystal structure of COQ8A-CA157 inhibitor complex in space group P1

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	GSP_synth	e7udqA1	A: alpha bundles	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: GSP_synth	ECOD (develop294)
B	GSP_synth	e7udqB1	A: alpha bundles	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: GSP_synth	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03109	ABC1 atypical kinase-like domain (ABC1)	ABC1 atypical kinase-like domain	This family includes ABC1 from yeast [1] and AarF from E. coli [2]. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cyto ...	This family includes ABC1 from yeast [1] and AarF from E. coli [2]. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [1] and E. coli AarF is required for ubiquinone production [2]. It has been suggested that members of the ABC1 family are novel chaperonins [1]. These proteins are unrelated to the ABC transporter proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Atypical kinase COQ8A, mitochondrial	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding ADP binding kinase activity transferase activity catalytic activity transferase activity, transferring phosphorus-containing groups enzyme regulator activity enzyme activator activity molecular function activator activity molecular function regulator activity catalytic activity, acting on a protein protein kinase activity phosphotransferase activity, alcohol group as acceptor	phosphorylation phosphate-containing compound metabolic process metabolic process cellular process phosphorus metabolic process small molecule biosynthetic process ketone metabolic process ubiquinone biosynthetic process quinone metabolic process biosynthetic process quinone biosynthetic process small molecule metabolic process ubiquinone metabolic process ketone biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane extrinsic component of organelle membrane mitochondrial inner membrane organelle envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane extrinsic component of organelle membrane mitochondrial inner membrane organelle envelope mitochondrial envelope extrinsic component of membrane organelle membrane extrinsic component of mitochondrial inner membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR034646	ADCK3-like domain	Domain
A, B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B	IPR051409	Atypical kinase ADCK	Family
A, B	IPR004147	ABC1 atypical kinase-like domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q8NI60	autosomal recessive ataxia due to ubiquinone deficiency coenzyme Q10 deficiency coenzyme Q10 deficiency, primary, 1 amyotrophic lateral sclerosis atypical teratoid rhabdoid tumor ductal breast carcinoma in situ juvenile dermatomyositis Mitochondrial Diseases pancreatic ductal adenocarcinoma astrocytic tumor intellectual disability leukodystrophy neurodegenerative disease psoriasis Charcot-Marie-Tooth disease autosomal recessive ataxia due to ubiquinone deficiency coenzyme Q10 deficiency coenzyme Q10 deficiency, primary, 1 amyotrophic lateral sclerosis atypical teratoid rhabdoid tumor ductal breast carcinoma in situ juvenile dermatomyositis Mitochondrial Diseases pancreatic ductal adenocarcinoma astrocytic tumor intellectual disability leukodystrophy neurodegenerative disease psoriasis Charcot-Marie-Tooth disease Duchenne muscular dystrophy invasive ductal breast carcinoma malignant pancreatic neoplasm osteosarcoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.