7T7C | pdb_00007t7c

The hexagonal organization of Munc13-1 C1-C2B-MUN-C2C domains between lipid bilayers

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	AAA_lid_RFC1	e7t7cL1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
K	AAA_lid_RFC1	e7t7cK1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
J	AAA_lid_RFC1	e7t7cJ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
I	AAA_lid_RFC1	e7t7cI1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
H	AAA_lid_RFC1	e7t7cH1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
G	AAA_lid_RFC1	e7t7cG1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
F	AAA_lid_RFC1	e7t7cF1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
E	AAA_lid_RFC1	e7t7cE1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
D	AAA_lid_RFC1	e7t7cD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
C	AAA_lid_RFC1	e7t7cC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
B	AAA_lid_RFC1	e7t7cB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
A	Nup188_C	e7t7cA01	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: Nup188_C	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF00130	Phorbol esters/diacylglycerol binding domain (C1 domain) (C1_1)	Phorbol esters/diacylglycerol binding domain (C1 domain)	This domain is also known as the Protein kinase C conserved region 1 (C1) domain.	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF06292	MUN domain (MUN)	MUN domain	-	Repeat
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF00168	C2 domain (C2)	C2 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Protein unc-13 homolog A Chimera	protein binding binding SNARE binding syntaxin binding lipid binding diacylglycerol binding phospholipid binding protein-containing complex binding calmodulin binding identical protein binding cytoskeletal protein binding spectrin binding cation binding ion binding protein binding binding SNARE binding syntaxin binding lipid binding diacylglycerol binding phospholipid binding protein-containing complex binding calmodulin binding identical protein binding cytoskeletal protein binding spectrin binding cation binding ion binding calcium ion binding metal ion binding small molecule binding protein domain specific binding syntaxin-1 binding transition metal ion binding zinc ion binding	vesicle localization establishment of organelle localization cellular localization regulated exocytosis transport secretion establishment of vesicle localization neuronal dense core vesicle exocytosis export from cell dense core granule exocytosis establishment of localization vesicle-mediated transport localization dense core granule localization secretion by cell vesicle localization establishment of organelle localization cellular localization regulated exocytosis transport secretion establishment of vesicle localization neuronal dense core vesicle exocytosis export from cell dense core granule exocytosis establishment of localization vesicle-mediated transport localization dense core granule localization secretion by cell exocytosis organelle localization establishment of localization in cell secretory granule localization cellular process calcium-ion regulated exocytosis membrane organization protein-containing complex organization membrane fusion organelle membrane fusion cellular component organization cellular component biogenesis vesicle organization organelle fusion organelle organization cellular component assembly protein-containing complex assembly SNARE complex assembly cellular component organization or biogenesis vesicle fusion regulation of biological process amyloid precursor protein catabolic process regulation of cellular process regulation of protein metabolic process biological regulation regulation of amyloid precursor protein catabolic process primary metabolic process regulation of macromolecule metabolic process regulation of primary metabolic process metabolic process protein metabolic process macromolecule metabolic process amyloid precursor protein metabolic process regulation of metabolic process regulation of synaptic plasticity trans-synaptic signaling regulation of signaling modulation of chemical synaptic transmission signaling cell-cell signaling chemical synaptic transmission cell communication positive regulation of synaptic plasticity synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication regulation of biological quality positive regulation of organelle organization regulation of localization regulation of cellular component organization positive regulation of cellular component organization positive regulation of biological process regulation of vesicle fusion positive regulation of cellular process regulation of transport regulation of vesicle-mediated transport regulation of organelle organization positive regulation of transport positive regulation of vesicle fusion synaptic vesicle cycle synaptic vesicle exocytosis vesicle-mediated transport in synapse regulation of calcium-dependent activation of synaptic vesicle fusion positive regulation of synaptic vesicle fusion to presynaptic active zone membrane regulation of synaptic vesicle membrane organization endomembrane system organization vesicle fusion to plasma membrane neurotransmitter secretion neurotransmitter transport positive regulation of synaptic vesicle membrane organization signal release from synapse calcium-dependent activation of synaptic vesicle fusion signal release regulation of synaptic vesicle fusion to presynaptic active zone membrane synaptic vesicle fusion to presynaptic active zone membrane synaptic vesicle membrane organization exocytic process synaptic vesicle priming regulation of synaptic vesicle priming regulation of protein-containing complex assembly regulation of cellular component biogenesis multicellular organismal process regulation of growth developmental growth cell projection organization neuron projection development regulation of cell morphogenesis positive regulation of developmental process multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development positive regulation of developmental growth system development developmental process nervous system development developmental growth involved in morphogenesis generation of neurons positive regulation of dendrite extension cellular developmental process regulation of developmental process plasma membrane bounded cell projection morphogenesis cell development cell growth cell morphogenesis neurogenesis dendrite extension regulation of anatomical structure morphogenesis neuron projection extension regulation of developmental growth plasma membrane bounded cell projection organization developmental cell growth growth regulation of dendrite extension positive regulation of cell growth regulation of cell growth anatomical structure morphogenesis positive regulation of growth neuron development animal gross anatomical part developmental process amyloid-beta metabolic process dense core granule priming cell junction organization neuromuscular junction development synapse organization regulation of neuronal synaptic plasticity regulation of short-term neuronal synaptic plasticity positive regulation of cell communication cellular response to stimulus positive regulation of signal transduction response to stimulus regulation of signal transduction glutamate receptor signaling pathway positive regulation of response to stimulus positive regulation of glutamate receptor signaling pathway signal transduction cell surface receptor signaling pathway regulation of glutamate receptor signaling pathway regulation of response to stimulus positive regulation of signaling positive regulation of neurotransmitter secretion positive regulation of secretion by cell regulation of secretion by cell positive regulation of secretion positive regulation of neurotransmitter transport regulation of neurotransmitter transport positive regulation of synaptic transmission regulation of secretion regulation of neurotransmitter secretion nerve development innervation long-term synaptic potentiation synaptic transmission, glutamatergic synaptic vesicle maturation developmental maturation	presynapse cellular anatomical structure synapse cell junction presynaptic active zone cell periphery membrane plasma membrane presynaptic membrane plasma membrane region synaptic membrane glutamatergic synapse cell projection neuron projection presynapse cellular anatomical structure synapse cell junction presynaptic active zone cell periphery membrane plasma membrane presynaptic membrane plasma membrane region synaptic membrane glutamatergic synapse cell projection neuron projection plasma membrane bounded cell projection neuromuscular junction axon axon terminus distal axon calyx of Held neuron projection terminus membrane-bounded organelle intracellular anatomical structure intracellular vesicle transport vesicle membrane endomembrane system intracellular organelle bounding membrane of organelle cytoplasmic vesicle vesicle membrane synaptic vesicle synaptic vesicle membrane vesicle transport vesicle exocytic vesicle membrane intracellular membrane-bounded organelle cytoplasmic vesicle membrane organelle secretory vesicle cytoplasm organelle membrane exocytic vesicle terminal bouton Golgi-associated vesicle protein-containing complex excitatory synapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR014770	Munc13 homology 1	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR037302	Protein Unc-13, C2B domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR014772	Mammalian uncoordinated homology 13, domain 2	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR027080	Protein Unc-13	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR000008	C2 domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR035892	C2 domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR010439	MUN domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR046349	C1-like domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.