Synechocystis PCC 6803 Phycobilisome rod from OCP-PBS complex sample
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| MA [auth BM] | SCOP2B Superfamily | Phycobilisome linker domain-like | 8052325 | 3002104 | SCOP2B (2022-06-29) |
| MA [auth BM] | SCOP2B Superfamily | Phycobilisome linker domain-like | 8052324 | 3002104 | SCOP2B (2022-06-29) |
| LA [auth BL] | SCOP2B Superfamily | Phycobilisome linker domain-like | 8052317 | 3002104 | SCOP2B (2022-06-29) |
| LA [auth BL] | SCOP2B Superfamily | Phycobilisome linker domain-like | 8052316 | 3002104 | SCOP2B (2022-06-29) |
| DA [auth BD] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| R [auth AR] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| X [auth AX] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| Z [auth AZ] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| V [auth AV] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| T [auth AT] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| P [auth AP] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| N [auth AN] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| L [auth AL] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| JA [auth BJ] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| J [auth AJ] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| HA [auth BH] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| H [auth AH] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| FA [auth BF] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| F [auth AF] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| D [auth AD] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| BA [auth BB] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| B [auth AB] | SCOP2B Superfamily | Globin-like | 8064834 | 3000554 | SCOP2B (2022-06-29) |
| A [auth AA] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| Y [auth AY] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| W [auth AW] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| U [auth AU] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| S [auth AS] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| Q [auth AQ] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| O [auth AO] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| M [auth AM] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| K [auth AK] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| IA [auth BI] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| I [auth AI] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| GA [auth BG] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| G [auth AG] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| EA [auth BE] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| E [auth AE] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| CA [auth BC] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| C [auth AC] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
| AA [auth BA] | SCOP2B Superfamily | Globin-like | 8064876 | 3000554 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| NA [auth BN] | ABC_membrane | e7scaBN1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| MA [auth BM] | ABC_membrane | e7scaBM1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| LA [auth BL] | ABC_membrane | e7scaBL1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| KA [auth BK] | ABC_membrane | e7scaBK1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| DA [auth BD] | ABC_membrane | e7scaBD1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| R [auth AR] | ABC_membrane | e7scaAR1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| X [auth AX] | ABC_membrane | e7scaAX1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| Z [auth AZ] | ABC_membrane | e7scaAZ1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| V [auth AV] | ABC_membrane | e7scaAV1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| T [auth AT] | ABC_membrane | e7scaAT1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| P [auth AP] | ABC_membrane | e7scaAP1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| N [auth AN] | ABC_membrane | e7scaAN1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| L [auth AL] | ABC_membrane | e7scaAL1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| JA [auth BJ] | ABC_membrane | e7scaBJ1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| J [auth AJ] | ABC_membrane | e7scaAJ1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| HA [auth BH] | ABC_membrane | e7scaBH1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| H [auth AH] | ABC_membrane | e7scaAH1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| FA [auth BF] | ABC_membrane | e7scaBF1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| F [auth AF] | ABC_membrane | e7scaAF1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| D [auth AD] | ABC_membrane | e7scaAD1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| BA [auth BB] | ABC_membrane | e7scaBB1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| B [auth AB] | ABC_membrane | e7scaAB1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| A [auth AA] | ABC_membrane | e7scaAA1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| Y [auth AY] | ABC_membrane | e7scaAY1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| W [auth AW] | ABC_membrane | e7scaAW1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| U [auth AU] | ABC_membrane | e7scaAU1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| S [auth AS] | ABC_membrane | e7scaAS1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| Q [auth AQ] | ABC_membrane | e7scaAQ1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| O [auth AO] | ABC_membrane | e7scaAO1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| M [auth AM] | ABC_membrane | e7scaAM1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| K [auth AK] | ABC_membrane | e7scaAK1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| IA [auth BI] | ABC_membrane | e7scaBI1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| I [auth AI] | ABC_membrane | e7scaAI1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| GA [auth BG] | ABC_membrane | e7scaBG1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| G [auth AG] | ABC_membrane | e7scaAG1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| EA [auth BE] | ABC_membrane | e7scaBE1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| E [auth AE] | ABC_membrane | e7scaAE1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| CA [auth BC] | ABC_membrane | e7scaBC1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| C [auth AC] | ABC_membrane | e7scaAC1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
| AA [auth BA] | ABC_membrane | e7scaBA1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: ABC_membrane | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| NA [auth BN] | PF01383 | CpcD/allophycocyanin linker domain (CpcD) | CpcD/allophycocyanin linker domain | Domain | |
| MA [auth BM] | PF00427 | Phycobilisome Linker polypeptide (PBS_linker_poly) | Phycobilisome Linker polypeptide | - | Family |
| MA [auth BM] | PF01383 | CpcD/allophycocyanin linker domain (CpcD) | CpcD/allophycocyanin linker domain | Domain | |
| LA [auth BL] | PF00427 | Phycobilisome Linker polypeptide (PBS_linker_poly) | Phycobilisome Linker polypeptide | - | Family |
| LA [auth BL] | PF01383 | CpcD/allophycocyanin linker domain (CpcD) | CpcD/allophycocyanin linker domain | Domain | |
| KA [auth BK] | PF00427 | Phycobilisome Linker polypeptide (PBS_linker_poly) | Phycobilisome Linker polypeptide | - | Family |
| PF00502 | Phycobilisome protein (Phycobilisome) | Phycobilisome protein | Domain | ||
| PF00502 | Phycobilisome protein (Phycobilisome) | Phycobilisome protein | Domain |














