7SC8 | pdb_00007sc8

Synechocystis PCC 6803 Phycobilisome rod from PBS sample


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
MA [auth BM]SCOP2B SuperfamilyPhycobilisome linker domain-like 8052324 3002104 SCOP2B (2022-06-29)
MA [auth BM]SCOP2B SuperfamilyPhycobilisome linker domain-like 8052325 3002104 SCOP2B (2022-06-29)
LA [auth BL]SCOP2B SuperfamilyPhycobilisome linker domain-like 8052317 3002104 SCOP2B (2022-06-29)
LA [auth BL]SCOP2B SuperfamilyPhycobilisome linker domain-like 8052316 3002104 SCOP2B (2022-06-29)
Z [auth AZ]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
X [auth AX]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
V [auth AV]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
T [auth AT]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
R [auth AR]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
P [auth AP]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
N [auth AN]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
L [auth AL]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
JA [auth BJ]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
J [auth AJ]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
HA [auth BH]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
H [auth AH]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
FA [auth BF]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
F [auth AF]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
DA [auth BD]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
D [auth AD]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
BA [auth BB]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
B [auth AB]SCOP2B SuperfamilyGlobin-like 8064834 3000554 SCOP2B (2022-06-29)
Y [auth AY]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
W [auth AW]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
U [auth AU]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
S [auth AS]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
Q [auth AQ]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
O [auth AO]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
M [auth AM]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
K [auth AK]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
IA [auth BI]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
I [auth AI]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
GA [auth BG]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
G [auth AG]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
EA [auth BE]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
CA [auth BC]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
AA [auth BA]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)
A [auth AA]SCOP2B SuperfamilyGlobin-like 8064876 3000554 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
NA [auth BN]ABC_membranee7sc8BN1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
MA [auth BM]ABC_membranee7sc8BM1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
LA [auth BL]ABC_membranee7sc8BL1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
KA [auth BK]ABC_membranee7sc8BK1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
Z [auth AZ]ABC_membranee7sc8AZ1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
X [auth AX]ABC_membranee7sc8AX1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
V [auth AV]ABC_membranee7sc8AV1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
T [auth AT]ABC_membranee7sc8AT1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
R [auth AR]ABC_membranee7sc8AR1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
P [auth AP]ABC_membranee7sc8AP1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
N [auth AN]ABC_membranee7sc8AN1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
L [auth AL]ABC_membranee7sc8AL1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
JA [auth BJ]ABC_membranee7sc8BJ1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
J [auth AJ]ABC_membranee7sc8AJ1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
HA [auth BH]ABC_membranee7sc8BH1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
H [auth AH]ABC_membranee7sc8AH1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
FA [auth BF]ABC_membranee7sc8BF1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
F [auth AF]ABC_membranee7sc8AF1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
DA [auth BD]ABC_membranee7sc8BD1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
D [auth AD]ABC_membranee7sc8AD1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
BA [auth BB]ABC_membranee7sc8BB1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
B [auth AB]ABC_membranee7sc8AB1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
Y [auth AY]ABC_membranee7sc8AY1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
W [auth AW]ABC_membranee7sc8AW1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
U [auth AU]ABC_membranee7sc8AU1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
S [auth AS]ABC_membranee7sc8AS1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
Q [auth AQ]ABC_membranee7sc8AQ1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
O [auth AO]ABC_membranee7sc8AO1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
M [auth AM]ABC_membranee7sc8AM1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
K [auth AK]ABC_membranee7sc8AK1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
IA [auth BI]ABC_membranee7sc8BI1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
I [auth AI]ABC_membranee7sc8AI1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
GA [auth BG]ABC_membranee7sc8BG1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
G [auth AG]ABC_membranee7sc8AG1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
EA [auth BE]ABC_membranee7sc8BE1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
E [auth AE]ABC_membranee7sc8AE1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
CA [auth BC]ABC_membranee7sc8BC1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
C [auth AC]ABC_membranee7sc8AC1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
AA [auth BA]ABC_membranee7sc8BA1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)
A [auth AA]ABC_membranee7sc8AA1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ABC_membraneECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
NA [auth BN]Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod-
MA [auth BM]Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 2-
LA [auth BL]Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 1-
KA [auth BK]Phycobilisome rod-core linker polypeptide CpcG-
C-phycocyanin beta subunit-
C-phycocyanin alpha subunit-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
NA [auth BN]IPR008213CpcD-like domainDomain
MA [auth BM]IPR016470Phycobilisome linker proteinFamily
MA [auth BM]IPR008213CpcD-like domainDomain
MA [auth BM]IPR001297Phycobilisome linker domainDomain
MA [auth BM]IPR038255Phycobilisome linker domain superfamilyHomologous Superfamily
LA [auth BL]IPR016470Phycobilisome linker proteinFamily
LA [auth BL]IPR008213CpcD-like domainDomain
LA [auth BL]IPR001297Phycobilisome linker domainDomain
LA [auth BL]IPR038255Phycobilisome linker domain superfamilyHomologous Superfamily
KA [auth BK]IPR016470Phycobilisome linker proteinFamily
KA [auth BK]IPR001297Phycobilisome linker domainDomain
KA [auth BK]IPR038255Phycobilisome linker domain superfamilyHomologous Superfamily
IPR038719Phycobilisome, alpha/beta subunit superfamilyHomologous Superfamily
IPR006247Phycocyanin, beta subunitFamily
IPR009050Globin-like superfamilyHomologous Superfamily
IPR012128Phycobilisome, alpha/beta subunitFamily
IPR038719Phycobilisome, alpha/beta subunit superfamilyHomologous Superfamily
IPR006246Phycocyanin, alpha subunitFamily
IPR009050Globin-like superfamilyHomologous Superfamily
IPR012128Phycobilisome, alpha/beta subunitFamily