7RYR
SthK R120A Open State 3
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth D] | F_UNCLASSIFIED | e7ryrD1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth D] | F_UNCLASSIFIED | e7ryrD2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth B] | F_UNCLASSIFIED | e7ryrB2 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth B] | F_UNCLASSIFIED | e7ryrB1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e7ryrA2 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e7ryrA1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth C] | F_UNCLASSIFIED | e7ryrC1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth C] | F_UNCLASSIFIED | e7ryrC2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth D], D [auth B] | PF07885 | Ion channel (Ion_trans_2) | Ion channel | - | Family |
A, B [auth C], C [auth D], D [auth B] | PF00027 | Cyclic nucleotide-binding domain (cNMP_binding) | Cyclic nucleotide-binding domain | This domain sensor domain can bind cAMP, cGMP, c-di-GMP, oxygen and 2-oxoglutarate (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth C], C [auth D], D [auth B] | SthK | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth D], D [auth B] | IPR013099 | Potassium channel domain | Domain |
A, B [auth C], C [auth D], D [auth B] | IPR018488 | Cyclic nucleotide-binding, conserved site | Conserved Site |
A, B [auth C], C [auth D], D [auth B] | IPR000595 | Cyclic nucleotide-binding domain | Domain |
A, B [auth C], C [auth D], D [auth B] | IPR018490 | Cyclic nucleotide-binding domain superfamily | Homologous Superfamily |
A, B [auth C], C [auth D], D [auth B] | IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Cyclic nucleotide-gated ion channel |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |