7RJD | pdb_00007rjd

Complex III2 from Candida albicans, inhibitor free, Rieske head domain in c position


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth H]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8104195 3000806 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8104193 3000770 SCOP2B (2022-06-29)
E [auth G]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8104325 3000797 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth B]Trypsine7rjdB1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
H [auth I]Trypsine7rjdI1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
G [auth H]Trypsine7rjdH1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
FTrypsine7rjdF1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
E [auth G]Trypsine7rjdG1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
DTrypsine7rjdD1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
C [auth K]Trypsine7rjdK1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
B [auth A]Trypsine7rjdA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
J [auth M]Trypsine7rjdM1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
A [auth E]Trypsine7rjdE2 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth B]PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. Domain
I [auth B]PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
G [auth H]PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge proteinThe ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c ...The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c complex.
Domain
PF02939UcrQ family (UcrQ)UcrQ family- Family
E [auth G]PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
C [auth K]PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petDDomain
C [auth K]PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petBDomain
B [auth A]PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. Domain
B [auth A]PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
A [auth E],
J [auth M]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth B]Cytochrome b-c1 complex subunit 2, mitochondrial
H [auth I]Ubiquinol--cytochrome-c reductase subunit 9-
G [auth H]Ubiquinol--cytochrome-c reductase subunit 6-
Ubiquinol--cytochrome-c reductase subunit 8
E [auth G]Cytochrome b-c1 complex subunit 7
Ubiquinol--cytochrome-c reductase catalytic subunit
C [auth K]Cytochrome b
B [auth A]Ubiquinol--cytochrome-c reductase subunit
A [auth E],
J [auth M]
Cytochrome b-c1 complex subunit Rieske, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth B]IPR007863Peptidase M16, C-terminalDomain
I [auth B]IPR011765Peptidase M16, N-terminalDomain
I [auth B]IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
I [auth B]IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
H [auth I]IPR008027Cytochrome b-c1 complex subunit 9Family
H [auth I]IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
G [auth H]IPR003422Cytochrome b-c1 complex, subunit 6Family
G [auth H]IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
G [auth H]IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
IPR004205Cytochrome b-c1 complex subunit 8Family
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
E [auth G]IPR003197Cytochrome b-c1 complex subunit 7Family
E [auth G]IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
IPR002326Cytochrome c1Family
IPR009056Cytochrome c-like domainDomain
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
C [auth K]IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C [auth K]IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C [auth K]IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C [auth K]IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C [auth K]IPR005798Cytochrome b/b6, C-terminalDomain
C [auth K]IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C [auth K]IPR030689Cytochrome bFamily
C [auth K]IPR005797Cytochrome b/b6, N-terminal domainDomain
B [auth A]IPR007863Peptidase M16, C-terminalDomain
B [auth A]IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B [auth A]IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
B [auth A]IPR011765Peptidase M16, N-terminalDomain
A [auth E],
J [auth M]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
A [auth E],
J [auth M]
IPR014349Rieske iron-sulphur proteinFamily
A [auth E],
J [auth M]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
A [auth E],
J [auth M]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
A [auth E],
J [auth M]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
A [auth E],
J [auth M]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
A [auth E],
J [auth M]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain