7RJA | pdb_00007rja

Complex III2 from Candida albicans, inhibitor free


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
O [auth R]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8104195 3000806 SCOP2B (2022-06-29)
F [auth H]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8104195 3000806 SCOP2B (2022-06-29)
N [auth P]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8104193 3000770 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8104193 3000770 SCOP2B (2022-06-29)
M [auth Q]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8104325 3000797 SCOP2B (2022-06-29)
D [auth G]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8104325 3000797 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
R [auth L]Trypsine7rjaL1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
I [auth B]Trypsine7rjaB1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
Q [auth M]Trypsine7rjaM2 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
H [auth C]Trypsine7rjaC2 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
P [auth S]Trypsine7rjaS1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
G [auth I]Trypsine7rjaI1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
O [auth R]Trypsine7rjaR1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
F [auth H]Trypsine7rjaH1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
N [auth P]Trypsine7rjaP1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
E [auth F]Trypsine7rjaF1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
M [auth Q]Trypsine7rjaQ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
D [auth G]Trypsine7rjaG1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
L [auth N]Trypsine7rjaN1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
C [auth D]Trypsine7rjaD1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
K [auth T]Trypsine7rjaT1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
B [auth K]Trypsine7rjaK1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
JTrypsine7rjaJ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)
ATrypsine7rjaA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth B],
R [auth L]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. Domain
I [auth B],
R [auth L]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
H [auth C],
Q [auth M]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
F [auth H],
O [auth R]
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge proteinThe ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c ...The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c complex.
Domain
E [auth F],
N [auth P]
PF02939UcrQ family (UcrQ)UcrQ family- Family
D [auth G],
M [auth Q]
PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
C [auth D],
L [auth N]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
B [auth K],
K [auth T]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petDDomain
B [auth K],
K [auth T]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petBDomain
A, J
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. Domain
A, J
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth B],
R [auth L]
Cytochrome b-c1 complex subunit 2, mitochondrial
H [auth C],
Q [auth M]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
G [auth I],
P [auth S]
Ubiquinol--cytochrome-c reductase subunit 9-
F [auth H],
O [auth R]
Ubiquinol--cytochrome-c reductase subunit 6-
E [auth F],
N [auth P]
Ubiquinol--cytochrome-c reductase subunit 8
D [auth G],
M [auth Q]
Cytochrome b-c1 complex subunit 7
C [auth D],
L [auth N]
Ubiquinol--cytochrome-c reductase catalytic subunit
B [auth K],
K [auth T]
Cytochrome b
A, J
Ubiquinol--cytochrome-c reductase subunit

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth B],
R [auth L]
IPR007863Peptidase M16, C-terminalDomain
I [auth B],
R [auth L]
IPR011765Peptidase M16, N-terminalDomain
I [auth B],
R [auth L]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
I [auth B],
R [auth L]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
H [auth C],
Q [auth M]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
H [auth C],
Q [auth M]
IPR014349Rieske iron-sulphur proteinFamily
H [auth C],
Q [auth M]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
H [auth C],
Q [auth M]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
H [auth C],
Q [auth M]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
H [auth C],
Q [auth M]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
H [auth C],
Q [auth M]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
G [auth I],
P [auth S]
IPR008027Cytochrome b-c1 complex subunit 9Family
G [auth I],
P [auth S]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
F [auth H],
O [auth R]
IPR003422Cytochrome b-c1 complex, subunit 6Family
F [auth H],
O [auth R]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
F [auth H],
O [auth R]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
E [auth F],
N [auth P]
IPR004205Cytochrome b-c1 complex subunit 8Family
E [auth F],
N [auth P]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
D [auth G],
M [auth Q]
IPR003197Cytochrome b-c1 complex subunit 7Family
D [auth G],
M [auth Q]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
C [auth D],
L [auth N]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
C [auth D],
L [auth N]
IPR002326Cytochrome c1Family
C [auth D],
L [auth N]
IPR009056Cytochrome c-like domainDomain
C [auth D],
L [auth N]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
B [auth K],
K [auth T]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
B [auth K],
K [auth T]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
B [auth K],
K [auth T]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
B [auth K],
K [auth T]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
B [auth K],
K [auth T]
IPR005798Cytochrome b/b6, C-terminalDomain
B [auth K],
K [auth T]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
B [auth K],
K [auth T]
IPR030689Cytochrome bFamily
B [auth K],
K [auth T]
IPR005797Cytochrome b/b6, N-terminal domainDomain
A, J
IPR007863Peptidase M16, C-terminalDomain
A, J
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A, J
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
A, J
IPR011765Peptidase M16, N-terminalDomain