7PXD | pdb_00007pxd

Substrate-engaged mycobacterial Proteasome-associated ATPase in complex with open-gate 20S CP - composite map (state B)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
FA [auth Z]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
O [auth I]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
Z [auth T]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
W [auth Q]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
U [auth O]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
Q [auth K]	SCOP2 Family	Proteasome subunits	8106087	4002254	SCOP2 (2022-06-29)
Q [auth K]	SCOP2 Superfamily	Class II glutamine amidotransferases	8106088	3000131	SCOP2 (2022-06-29)
Q [auth K]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
JA [auth f]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
IA [auth d]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
F [auth 8]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
E [auth 6]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
DA [auth X]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
D [auth 4]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
C [auth 2]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
A [auth 0]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
L [auth F]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
K [auth E]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
J [auth D]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
I [auth C]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
H [auth B]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
G [auth A]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
AA [auth U]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
CA [auth W]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
EA [auth Y]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
GA [auth a]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
Y [auth S]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
X [auth R]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
V [auth P]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
T [auth N]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
S [auth M]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
R [auth L]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
P [auth J]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
N [auth H]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
HA [auth b]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
BA [auth V]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
FA [auth Z]	Proteasome	e7pxdZ1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
O [auth I]	Proteasome	e7pxdI1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
Z [auth T]	Proteasome	e7pxdT1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
W [auth Q]	Proteasome	e7pxdQ1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
U [auth O]	Proteasome	e7pxdO1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
Q [auth K]	Proteasome	e7pxdK1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
JA [auth f]	Proteasome	e7pxdf1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
IA [auth d]	Proteasome	e7pxdd1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
F [auth 8]	Proteasome	e7pxd81	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
E [auth 6]	Proteasome	e7pxd61	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
DA [auth X]	Proteasome	e7pxdX1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
D [auth 4]	Proteasome	e7pxd41	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
C [auth 2]	Proteasome	e7pxd21	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
A [auth 0]	Proteasome	e7pxd01	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
L [auth F]	Prot_ATP_ID_OB_C	e7pxdF2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
L [auth F]	Prot_ATP_ID_OB_N	e7pxdF3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
L [auth F]	F_UNCLASSIFIED	e7pxdF4	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
L [auth F]	Sigma54_activat	e7pxdF1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
K [auth E]	Prot_ATP_ID_OB_C	e7pxdE3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
K [auth E]	Prot_ATP_ID_OB_N	e7pxdE2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
K [auth E]	F_UNCLASSIFIED	e7pxdE1	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
K [auth E]	Sigma54_activat	e7pxdE4	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
J [auth D]	Prot_ATP_ID_OB_C	e7pxdD3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
J [auth D]	Prot_ATP_ID_OB_N	e7pxdD4	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
J [auth D]	F_UNCLASSIFIED	e7pxdD1	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
J [auth D]	Sigma54_activat	e7pxdD2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
I [auth C]	Prot_ATP_ID_OB_C	e7pxdC3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
I [auth C]	Prot_ATP_ID_OB_N	e7pxdC1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
I [auth C]	F_UNCLASSIFIED	e7pxdC2	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
I [auth C]	Sigma54_activat	e7pxdC4	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
H [auth B]	Prot_ATP_ID_OB_C	e7pxdB3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
H [auth B]	Prot_ATP_ID_OB_N	e7pxdB2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
H [auth B]	F_UNCLASSIFIED	e7pxdB1	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
H [auth B]	Sigma54_activat	e7pxdB4	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
G [auth A]	Prot_ATP_ID_OB_C	e7pxdA1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
G [auth A]	Prot_ATP_ID_OB_N	e7pxdA4	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
G [auth A]	F_UNCLASSIFIED	e7pxdA3	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
G [auth A]	Sigma54_activat	e7pxdA2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
AA [auth U]	Proteasome	e7pxdU1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
CA [auth W]	Proteasome	e7pxdW1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
EA [auth Y]	Proteasome	e7pxdY1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
GA [auth a]	Proteasome	e7pxda1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
Y [auth S]	Proteasome	e7pxdS1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
X [auth R]	Proteasome	e7pxdR1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
V [auth P]	Proteasome	e7pxdP1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
T [auth N]	Proteasome	e7pxdN1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
S [auth M]	Proteasome	e7pxdM1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
R [auth L]	Proteasome	e7pxdL1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
P [auth J]	Proteasome	e7pxdJ1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
N [auth H]	Proteasome	e7pxdH1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
HA [auth b]	Proteasome	e7pxdb1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
BA [auth V]	Proteasome	e7pxdV1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	PF00227	Proteasome subunit (Proteasome)	Proteasome subunit	The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...	The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	PF00227	Proteasome subunit (Proteasome)	Proteasome subunit	The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...	The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	PF16450	Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)	Proteasomal ATPase OB C-terminal domain	This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2]	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	PF17758	Proteasomal ATPase OB N-terminal domain (Prot_ATP_ID_OB_N)	Proteasomal ATPase OB N-terminal domain	This is N-terminal interdomain (ID), oligonucleotide binding (OB) domain of proteasomal ATPase [1-2].	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	PF00004	ATPase family associated with various cellular activities (AAA) (AAA)	ATPase family associated with various cellular activities (AAA)	AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2].	Domain
M [auth G]	PF05639	Pup-like protein (Pup)	Pup-like protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	Proteasome subunit alpha	peptidase activity catalytic activity, acting on a protein threonine-type peptidase activity hydrolase activity catalytic activity endopeptidase activity threonine-type endopeptidase activity	catabolic process proteolysis involved in protein catabolic process proteasomal protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process proteolysis metabolic process cellular process protein metabolic process macromolecule metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process catabolic process proteolysis involved in protein catabolic process proteasomal protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process proteolysis metabolic process cellular process protein metabolic process macromolecule metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host defenses symbiont-mediated response to host defenses response to external stimulus response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction response to host response to external biotic stimulus	protein-containing complex intracellular anatomical structure cellular anatomical structure proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex cell periphery plasma membrane membrane external encapsulating structure protein-containing complex intracellular anatomical structure cellular anatomical structure proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex cell periphery plasma membrane membrane external encapsulating structure cell wall peptidoglycan-based cell wall cytoplasm
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	AAA ATPase forming ring-shaped complexes	protein-macromolecule adaptor activity ubiquitin-like protein reader activity molecular adaptor activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding protein-macromolecule adaptor activity ubiquitin-like protein reader activity molecular adaptor activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity ATP-dependent peptidase activity peptidase activity catalytic activity, acting on a protein identical protein binding protein binding	catabolic process proteolysis involved in protein catabolic process proteasomal protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process proteolysis metabolic process cellular process protein metabolic process macromolecule metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasomal ubiquitin-independent protein catabolic process catabolic process proteolysis involved in protein catabolic process proteasomal protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process proteolysis metabolic process cellular process protein metabolic process macromolecule metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasomal ubiquitin-independent protein catabolic process protein unfolding response to nitrosative stress response to stimulus response to stress symbiont-mediated perturbation of host defense response cellular response to stimulus biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host immune response cellular response to oxidative stress cellular response to chemical stress biological process involved in interaction with host biological process involved in symbiotic interaction response to oxidative stress cellular response to chemical stimulus cellular response to stress symbiont-mediated perturbation of host process response to chemical symbiont defense to host-produced reactive oxygen species symbiont-mediated perturbation of host innate immune response modulation of process of another organism cellular response to nitrogen compound response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to nitric oxide response to nitric oxide cellular response to reactive nitrogen species response to other organism symbiont-mediated perturbation of host defenses symbiont-mediated response to host defenses response to external stimulus response to biotic stimulus response to host response to external biotic stimulus	cell periphery cellular anatomical structure plasma membrane membrane external encapsulating structure cell wall peptidoglycan-based cell wall proteasome accessory complex protein-containing complex intracellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex cell periphery cellular anatomical structure plasma membrane membrane external encapsulating structure cell wall peptidoglycan-based cell wall proteasome accessory complex protein-containing complex intracellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome-activating nucleotidase complex intracellular protein-containing complex
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	Proteasome subunit beta	peptidase activity catalytic activity, acting on a protein threonine-type peptidase activity hydrolase activity catalytic activity endopeptidase activity threonine-type endopeptidase activity protein binding binding enzyme binding zymogen binding	catabolic process proteolysis involved in protein catabolic process proteasomal protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process proteolysis metabolic process cellular process protein metabolic process macromolecule metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process catabolic process proteolysis involved in protein catabolic process proteasomal protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process proteolysis metabolic process cellular process protein metabolic process macromolecule metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host defenses symbiont-mediated response to host defenses response to external stimulus response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction response to host response to external biotic stimulus	cellular anatomical structure extracellular region cell periphery plasma membrane membrane protein-containing complex intracellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex cellular anatomical structure extracellular region cell periphery plasma membrane membrane protein-containing complex intracellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex cytoplasm
M [auth G]	Prokaryotic ubiquitin-like protein Pup	protein tag activity molecular tag activity molecular adaptor activity protein-containing complex binding binding proteasome binding	catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis metabolic process cellular process macromolecule metabolic process protein metabolic process peptidyl-lysine modification macromolecule modification catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis metabolic process cellular process macromolecule metabolic process protein metabolic process peptidyl-lysine modification macromolecule modification protein pupylation peptidyl-amino acid modification protein modification process post-translational protein modification protein modification by small protein conjugation protein modification by small protein conjugation or removal proteasomal protein catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR022296	Proteasome, alpha subunit, bacterial	Family
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR050115	Proteasome subunit alpha	Family
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR023332	Proteasome alpha-type subunit	Family
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR001353	Proteasome, subunit alpha/beta	Family
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR041626	Proteasomal ATPase, N-terminal OB domain	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR003593	AAA+ ATPase domain	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR003959	ATPase, AAA-type, core	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR050168	AAA ATPase domain-containing protein	Family
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR032501	Proteasomal ATPase, second OB domain	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR022482	Proteasome ATPase	Family
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR003960	ATPase, AAA-type, conserved site	Conserved Site
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	IPR023333	Proteasome B-type subunit	Family
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	IPR022483	Proteasome subunit beta, actinobacteria	Family
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	IPR001353	Proteasome, subunit alpha/beta	Family
M [auth G]	IPR008515	Prokaryotic ubiquitin-like protein Pup	Family