7PKE
C-reactive protein pentamer at pH 7.5 with phosphocholine ligand
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth E] | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8041434 | 3000120 | SCOP2B (2022-06-29) |
B [auth D] | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8041434 | 3000120 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8041434 | 3000120 | SCOP2B (2022-06-29) |
E [auth A] | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8041434 | 3000120 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8041434 | 3000120 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | PF00354 | e7pkeE1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF00354 | ECOD (1.6) |
B [auth D] | PF00354 | e7pkeD1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF00354 | ECOD (1.6) |
D [auth B] | PF00354 | e7pkeB1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF00354 | ECOD (1.6) |
E [auth A] | PF00354 | e7pkeA1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF00354 | ECOD (1.6) |
C | PF00354 | e7pkeC1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF00354 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth E], B [auth D], C, D [auth B], E [auth A] | PF00354 | Pentaxin family (Pentaxin) | Pentaxin family | Pentaxins are also known as pentraxins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth E], B [auth D], C, D [auth B], E [auth A] | IPR001759 | Pentraxin-related | Family |
A [auth E], B [auth D], C, D [auth B], E [auth A] | IPR030476 | Pentaxin, conserved site | Conserved Site |
A [auth E], B [auth D], C, D [auth B], E [auth A] | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily |