7PI0 | pdb_00007pi0

Unstacked compact Dunaliella PSII


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Z [auth a]e7pi0a1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
Ae7pi0A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
Be7pi0B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
AA [auth b]e7pi0b1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
C [auth V]e7pi0V1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
BA [auth v]e7pi0v1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
D [auth C]e7pi0C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
CA [auth c]e7pi0c1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
E [auth D]e7pi0D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
DA [auth d]e7pi0d1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
G [auth F]e7pi0F1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
FA [auth f]e7pi0f1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
Ie7pi0I1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
HA [auth i]e7pi0i1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
Je7pi0J1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
IA [auth j]e7pi0j1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
Ke7pi0K1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
JA [auth k]e7pi0k1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
Me7pi0M1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
LA [auth m]e7pi0m1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
N [auth O]e7pi0O1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
MA [auth o]e7pi0o1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
O [auth P]e7pi0P1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
NA [auth p]e7pi0p1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
P [auth T]e7pi0T1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
OA [auth t]e7pi0t1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
Q [auth W]e7pi0W1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
PA [auth w]e7pi0w1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
R [auth X]e7pi0X1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
QA [auth x]e7pi0x1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
S [auth Z]e7pi0Z1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
RA [auth z]e7pi0z1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
T [auth N]e7pi0N1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
SA [auth n]e7pi0n1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
U [auth G]e7pi0G1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
TA [auth g]e7pi0g1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
W [auth S]e7pi0S1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
VA [auth s]e7pi0s1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
X [auth Y]e7pi0Y1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
WA [auth y]e7pi0y1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
He7pi0H1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
GA [auth h]e7pi0h1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
F [auth E]e7pi0E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
EA [auth e]e7pi0e1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
V [auth R]e7pi0R1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
UA [auth r]e7pi0r1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
Le7pi0L1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)
KA [auth l]e7pi0l1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
Z [auth a]1.20.85.10 Mainly Alpha Up-down Bundle Photosynthetic Reaction Center, subunit M domain 1CATH (utative)
A1.20.85.10 Mainly Alpha Up-down Bundle Photosynthetic Reaction Center, subunit M domain 1CATH (utative)
T [auth N]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
SA [auth n]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
U [auth G]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
TA [auth g]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
W [auth S]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
VA [auth s]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
X [auth Y]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
WA [auth y]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
F [auth E]1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (utative)
EA [auth e]1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
Z [auth a]
Photosystem II protein D1
AA [auth b],
B
Photosystem II CP47 reaction center protein
BA [auth v],
C [auth V]
Photosystem II reaction center protein Ycf12-
CA [auth c],
D [auth C]
Photosystem II CP43 reaction center protein
DA [auth d],
E [auth D]
Photosystem II D2 protein
FA [auth f],
G [auth F]
Cytochrome b559 subunit beta
HA [auth i],
I
Photosystem II reaction center protein I-
IA [auth j],
J
Photosystem II reaction center protein J-
JA [auth k],
K
Photosystem II reaction center protein K-
LA [auth m],
M
Photosystem II reaction center protein M-
MA [auth o],
N [auth O]
Oxygen-evolving enhancer protein 1, chloroplastic
NA [auth p],
O [auth P]
Oxygen-evolving enhancer protein 2, chloroplastic
OA [auth t],
P [auth T]
Photosystem II reaction center protein T-
PA [auth w],
Q [auth W]
PSII 6.1 kDa protein-
QA [auth x],
R [auth X]
Hypothetical protein-
RA [auth z],
S [auth Z]
Photosystem II reaction center protein Z-
SA [auth n],
T [auth N]
Chlorophyll a-b binding protein of LHCII type 3, chloroplastic
TA [auth g],
U [auth G]
Chlorophyll a-b binding protein of LHCII type 2, chloroplastic
VA [auth s],
W [auth S]
Chlorophyll a-b binding protein, chloroplastic, CP26
WA [auth y],
X [auth Y]
Chlorophyll a-b binding protein of LHCII type 1, chloroplastic
XA [auth u],
Y [auth U]
Photosystem II extrinsic protein U---
GA [auth h],
H
Photosystem II reaction center protein H
EA [auth e],
F [auth E]
Cytochrome b559 subunit alpha
UA [auth r],
V [auth R]
Chlorophyll a-b binding protein, chloroplastic, CP29---
KA [auth l],
L
Photosystem II reaction center protein L-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
Z [auth a]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
A,
Z [auth a]
IPR005867Photosystem II protein D1Family
A,
Z [auth a]
IPR000484Photosynthetic reaction centre, L/MFamily
A,
Z [auth a]
IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
A,
Z [auth a]
IPR055266Photosystem II protein D1/D2Family
AA [auth b],
B
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
AA [auth b],
B
IPR000932Photosystem antenna protein-likeFamily
AA [auth b],
B
IPR017486Photosystem II CP47 reaction centre proteinFamily
BA [auth v],
C [auth V]
IPR010284Photosystem II reaction center protein Ycf12Family
CA [auth c],
D [auth C]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
CA [auth c],
D [auth C]
IPR000932Photosystem antenna protein-likeFamily
CA [auth c],
D [auth C]
IPR005869Photosystem II CP43 reaction centre proteinFamily
CA [auth c],
D [auth C]
IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
DA [auth d],
E [auth D]
IPR005868Photosystem II D2Family
DA [auth d],
E [auth D]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
DA [auth d],
E [auth D]
IPR000484Photosynthetic reaction centre, L/MFamily
DA [auth d],
E [auth D]
IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
DA [auth d],
E [auth D]
IPR055266Photosystem II protein D1/D2Family
FA [auth f],
G [auth F]
IPR006241Photosystem II cytochrome b559, beta subunitFamily
FA [auth f],
G [auth F]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
FA [auth f],
G [auth F]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
HA [auth i],
I
IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
HA [auth i],
I
IPR003686Photosystem II PsbIFamily
IA [auth j],
J
IPR002682Photosystem II PsbJFamily
IA [auth j],
J
IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
JA [auth k],
K
IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
JA [auth k],
K
IPR003687Photosystem II PsbKFamily
LA [auth m],
M
IPR007826Photosystem II PsbMFamily
LA [auth m],
M
IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
MA [auth o],
N [auth O]
IPR011250Outer membrane protein/outer membrane enzyme PagP, beta-barrelHomologous Superfamily
MA [auth o],
N [auth O]
IPR002628Photosystem II extrinsic protein OFamily
NA [auth p],
O [auth P]
IPR002683PsbP, C-terminalDomain
NA [auth p],
O [auth P]
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichHomologous Superfamily
OA [auth t],
P [auth T]
IPR001743Photosystem II PsbTFamily
OA [auth t],
P [auth T]
IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
PA [auth w],
Q [auth W]
IPR009806Photosystem II PsbW, class 2Family
QA [auth x],
R [auth X]
IPR009518Photosystem II PsbXFamily
RA [auth z],
S [auth Z]
IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
RA [auth z],
S [auth Z]
IPR002644Photosystem II PsbZ, reaction centreFamily
SA [auth n],
T [auth N]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
SA [auth n],
T [auth N]
IPR022796Chlorophyll A-B binding proteinFamily
TA [auth g],
U [auth G]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
TA [auth g],
U [auth G]
IPR022796Chlorophyll A-B binding proteinFamily
VA [auth s],
W [auth S]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
VA [auth s],
W [auth S]
IPR022796Chlorophyll A-B binding proteinFamily
WA [auth y],
X [auth Y]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
WA [auth y],
X [auth Y]
IPR022796Chlorophyll A-B binding proteinFamily
GA [auth h],
H
IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
GA [auth h],
H
IPR001056Photosystem II reaction centre protein HFamily
EA [auth e],
F [auth E]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
EA [auth e],
F [auth E]
IPR006217Photosystem II cytochrome b559, alpha subunitFamily
EA [auth e],
F [auth E]
IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
EA [auth e],
F [auth E]
IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
EA [auth e],
F [auth E]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
KA [auth l],
L
IPR003372Photosystem II PsbLFamily
KA [auth l],
L
IPR037266Photosystem II PsbL superfamilyHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
AA [auth b],
B
CSD Parent Component: CYS

RESIDAA0262

PSI-MOD :  L-cysteine sulfinic acid MOD:00267
UA [auth r],
V [auth R]
SEP Parent Component: SER

RESIDAA0262 , AA0037

PSI-MOD :  L-cysteine sulfinic acid MOD:00267 , O-phospho-L-serine MOD:00046