Nucleosome stack of the 4x187 nucleosome array containing H1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| Q [auth U] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8102134 | 3000034 | SCOP2B (2022-06-29) |
| P [auth H] | SCOP2B Superfamily | Core histone-like | 8039341 | 3001387 | SCOP2B (2022-06-29) |
| L [auth D] | SCOP2B Superfamily | Core histone-like | 8039341 | 3001387 | SCOP2B (2022-06-29) |
| H [auth R] | SCOP2B Superfamily | Core histone-like | 8039341 | 3001387 | SCOP2B (2022-06-29) |
| D [auth N] | SCOP2B Superfamily | Core histone-like | 8039341 | 3001387 | SCOP2B (2022-06-29) |
| O [auth G] | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
| K [auth C] | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
| G [auth Q] | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
| C [auth M] | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
| N [auth F] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
| J [auth B] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
| F [auth P] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
| B [auth L] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
| M [auth E] | SCOP2B Superfamily | Core histone-like | 8070531 | 3001387 | SCOP2B (2022-06-29) |
| I [auth A] | SCOP2B Superfamily | Core histone-like | 8070531 | 3001387 | SCOP2B (2022-06-29) |
| E [auth O] | SCOP2B Superfamily | Core histone-like | 8070531 | 3001387 | SCOP2B (2022-06-29) |
| A [auth K] | SCOP2B Superfamily | Core histone-like | 8070531 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Q [auth U] | e7pf2U1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| P [auth H] | e7pf2H1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| L [auth D] | e7pf2D1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| H [auth R] | e7pf2R1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| D [auth N] | e7pf2N1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| O [auth G] | e7pf2G1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| K [auth C] | e7pf2C1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| G [auth Q] | e7pf2Q1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| C [auth M] | e7pf2M1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| N [auth F] | e7pf2F1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| J [auth B] | e7pf2B1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| F [auth P] | e7pf2P1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| B [auth L] | e7pf2L1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| M [auth E] | e7pf2E1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| I [auth A] | e7pf2A1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| E [auth O] | e7pf2O1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) | |
| A [auth K] | e7pf2K1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: | F: | ECOD (20:10:01) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| Q [auth U] | PF00538 | linker histone H1 and H5 family (Linker_histone) | linker histone H1 and H5 family | Linker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures Histone H1 is replaced by histone H5 in some cell types. | Domain |
| C [auth M], G [auth Q], K [auth C], O [auth G] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |
| B [auth L], F [auth P], J [auth B], N [auth F] | PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |
| A [auth K], E [auth O], I [auth A], M [auth E] | PF00125 | Core histone H2A/H2B/H3/H4 domain (Histone) | Core histone H2A/H2B/H3/H4 domain | Domain |














