7P71 | pdb_00007p71

The PDZ domain of MAGI1_2 complexed with the PDZ-binding motif of HPV35-E6

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Annexin	8043314	3000627	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Annexin	8043314	3000627	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Fe_hyd_lg_C	e7p71B1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: Fe_hyd_lg_C	ECOD (v294.1)
A	Fe_hyd_lg_C	e7p71A1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: Fe_hyd_lg_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.220.10	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (utative)
A	1.10.220.10	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00191	Annexin (Annexin)	Annexin	This family of annexins also includes giardin that has been shown to function as an annexin [1].	Domain
A, B	PF00595	PDZ domain (PDZ)	PDZ domain	PDZ domains are found in diverse signaling proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D	Protein E6	DNA binding binding nucleic acid binding protein binding PDZ domain binding protein domain specific binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process symbiont-mediated perturbation of host defense response symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response biological process involved in interaction with host symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host process symbiont-mediated perturbation of host innate immune response symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway symbiont-mediated perturbation of host ubiquitin-like protein modification symbiont-mediated suppression of host interferon-mediated signaling pathway symbiont-mediated suppression of host type I interferon-mediated signaling pathway symbiont-mediated perturbation of host programmed cell death symbiont-mediated perturbation of host apoptosis	host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle host cell cytoplasm
A, B	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1,Annexin A2	cytoskeletal protein binding protein binding binding cell adhesion molecule binding cadherin binding involved in cell-cell adhesion cadherin binding cell adhesion mediator activity cell-cell adhesion mediator activity calcium-dependent phospholipid binding phospholipid binding lipid binding identical protein binding modified amino acid binding ion binding cytoskeletal protein binding protein binding binding cell adhesion molecule binding cadherin binding involved in cell-cell adhesion cadherin binding cell adhesion mediator activity cell-cell adhesion mediator activity calcium-dependent phospholipid binding phospholipid binding lipid binding identical protein binding modified amino acid binding ion binding anion binding phosphatidylserine binding small molecule binding cation binding calcium ion binding metal ion binding enzyme binding protease binding RNA binding nucleic acid binding phosphatidylinositol-4,5-bisphosphate binding phosphatidylinositol bisphosphate binding phosphatidylinositol phosphate binding enzyme regulator activity molecular function inhibitor activity peptidase regulator activity serine-type endopeptidase inhibitor activity molecular function regulator activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity S100 protein binding calcium-dependent protein binding phospholipase inhibitor activity phospholipase A2 inhibitor activity lipase inhibitor activity alpha-actinin binding actinin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding	developmental process multicellular organismal process regulation of multicellular organismal development regulation of biological process regulation of cellular process regulation of developmental process cellular developmental process biological regulation cell development regulation of neurogenesis regulation of cell differentiation nervous system development regulation of cell development regulation of nervous system development multicellular organism development developmental process multicellular organismal process regulation of multicellular organismal development regulation of biological process regulation of cellular process regulation of developmental process cellular developmental process biological regulation cell development regulation of neurogenesis regulation of cell differentiation nervous system development regulation of cell development regulation of nervous system development multicellular organism development neurogenesis cell differentiation anatomical structure development regulation of multicellular organismal process cellular process system development regulation of protein maturation positive regulation of protein maturation positive regulation of protein metabolic process positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of protein processing protein maturation regulation of primary metabolic process positive regulation of metabolic process positive regulation of plasminogen activation regulation of proteolysis positive regulation of biosynthetic process proteolysis regulation of plasminogen activation positive regulation of macromolecule metabolic process protein metabolic process plasminogen activation positive regulation of cellular process zymogen activation regulation of biosynthetic process regulation of protein metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression positive regulation of proteolysis regulation of protein processing protein processing metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process regulation of body fluid levels response to stimulus regulation of response to external stimulus negative regulation of biological process regulation of response to wounding regulation of coagulation response to stress regulation of response to stress coagulation regulation of biological quality response to wounding regulation of hemostasis wound healing negative regulation of response to stimulus negative regulation of wound healing regulation of blood coagulation negative regulation of blood coagulation hemostasis response to external stimulus negative regulation of response to wounding blood coagulation negative regulation of hemostasis fibrinolysis negative regulation of coagulation regulation of response to stimulus negative regulation of response to external stimulus regulation of wound healing negative regulation of multicellular organismal process regulation of localization import into cell regulation of cellular component organization receptor internalization transport negative regulation of transport negative regulation of endocytosis regulation of receptor internalization vesicle-mediated transport cellular component organization localization negative regulation of cellular process cellular component organization or biogenesis regulation of endocytosis negative regulation of cellular component organization regulation of transport negative regulation of receptor-mediated endocytosis regulation of receptor-mediated endocytosis regulation of vesicle-mediated transport establishment of localization endocytosis receptor-mediated endocytosis negative regulation of receptor internalization positive regulation of organelle organization positive regulation of cellular component organization membrane fusion organelle membrane fusion regulation of vesicle fusion vesicle organization membrane organization regulation of organelle organization organelle fusion organelle organization positive regulation of transport positive regulation of vesicle fusion vesicle fusion collagen fibril organization extracellular matrix organization extracellular structure organization external encapsulating structure organization positive regulation of low-density lipoprotein particle clearance regulation of plasma lipoprotein particle levels regulation of low-density lipoprotein particle clearance positive regulation of lipoprotein particle clearance plasma lipoprotein particle clearance regulation of lipoprotein particle clearance positive regulation of multicellular organismal process low-density lipoprotein particle clearance positive regulation of intracellular lipid transport positive regulation of intracellular cholesterol transport regulation of intracellular cholesterol transport positive regulation of endocytosis establishment of localization in cell sterol transport positive regulation of receptor-mediated endocytosis regulation of intracellular transport regulation of sterol transport intracellular lipid transport intracellular transport lipid transport positive regulation of lipid transport cholesterol transport cellular localization positive regulation of sterol transport regulation of intracellular sterol transport intracellular cholesterol transport regulation of lipid transport positive regulation of receptor-mediated endocytosis involved in cholesterol transport organic hydroxy compound transport intracellular sterol transport receptor-mediated endocytosis involved in cholesterol transport positive regulation of intracellular transport positive regulation of intracellular sterol transport regulation of cholesterol transport positive regulation of cholesterol transport regulation of intracellular lipid transport lipid localization positive regulation of lipid localization regulation of lipid localization regulation of cellular localization macromolecule localization vesicle budding from membrane cellular component biogenesis cellular component assembly membrane raft organization membrane biogenesis membrane raft assembly membrane assembly mRNA transcription by RNA polymerase II RNA metabolic process nucleobase-containing compound biosynthetic process mRNA transcription mRNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process DNA-templated transcription nucleic acid biosynthetic process transcription by RNA polymerase II cell adhesion myeloid leukocyte differentiation hemopoiesis animal organ development osteoclast development skeletal system development myeloid cell differentiation bone cell development osteoclast differentiation myeloid cell development bone development leukocyte differentiation positive regulation of DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription vacuole organization positive regulation of vacuole organization regulation of vacuole organization cell-matrix adhesion cell-substrate adhesion receptor catabolic process catabolic process macromolecule catabolic process negative regulation of protein catabolic process negative regulation of low-density lipoprotein particle receptor catabolic process receptor metabolic process regulation of low-density lipoprotein particle receptor catabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process negative regulation of catabolic process negative regulation of receptor catabolic process negative regulation of metabolic process low-density lipoprotein particle receptor catabolic process protein catabolic process regulation of catabolic process low-density lipoprotein receptor particle metabolic process regulation of receptor catabolic process regulation of protein catabolic process blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development anatomical structure morphogenesis tube morphogenesis anatomical structure formation involved in morphogenesis blood vessel development positive regulation of secretion by cell positive regulation of exocytosis regulation of secretion by cell secretion by cell positive regulation of secretion secretion export from cell regulation of secretion exocytosis regulation of exocytosis response to activity apoptotic process cell death programmed cell death epithelial cell apoptotic process respiratory tube development lung development respiratory system development regulation of signaling signaling regulation of receptor recycling receptor recycling positive regulation of receptor recycling positive regulation of signaling plasma membrane repair regulation of plasma membrane organization plasma membrane organization regulation of plasma membrane repair positive regulation of plasma membrane repair endomembrane system organization protein-containing complex organization protein-containing complex assembly epithelium development endothelial cell differentiation endothelium development tissue development epithelial cell differentiation cell morphogenesis endothelial cell development epithelial cell development endothelial cell morphogenesis epithelial cell morphogenesis positive regulation of cell adhesion regulation of cell adhesion positive regulation of cell-cell adhesion cell-cell adhesion regulation of cell-cell adhesion cellular response to stimulus signal transduction cell communication cell surface receptor signaling pathway	cell periphery cellular anatomical structure plasma membrane membrane cornified envelope basement membrane extracellular matrix external encapsulating structure extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle cell periphery cellular anatomical structure plasma membrane membrane cornified envelope basement membrane extracellular matrix external encapsulating structure extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol myelin sheath adaxonal region myelin sheath sarcolemma basal part of cell basal plasma membrane plasma membrane region basolateral plasma membrane endosome membrane endosome intracellular vesicle late endosome membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle cytoplasmic vesicle vesicle membrane late endosome organelle membrane cell-cell junction adherens junction anchoring junction cell junction PCSK9-AnxA2 complex protein-containing complex vacuolar membrane lytic vacuole vacuole lytic vacuole membrane lysosomal membrane lysosome plasma membrane protein complex membrane protein complex midbody nucleus membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear lumen nuclear matrix pigment granule melanosome AnxA2-p11 complex RNA polymerase II transcription regulator complex nuclear protein-containing complex transcription regulator complex cell surface cytoplasmic vesicle lumen vacuolar lumen vesicle lumen azurophil granule secretory granule lumen azurophil granule lumen secretory granule primary lysosome secretory vesicle early endosome compact myelin Schmidt-Lanterman incisure lipid droplet membraneless organelle intracellular membraneless organelle nucleolus nucleoplasm apical junction complex bicellular tight junction tight junction cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D	IPR038575	E6 superfamily	Homologous Superfamily
C, D	IPR001334	E6 early regulatory protein	Family
A, B	IPR002389	Annexin A2	Family
A, B	IPR018252	Annexin repeat, conserved site	Conserved Site
A, B	IPR037104	Annexin superfamily	Homologous Superfamily
A, B	IPR018502	Annexin repeat	Repeat
A, B	IPR001464	Annexin	Family
A, B	IPR008145	Guanylate kinase/L-type calcium channel beta subunit	Domain
A, B	IPR036020	WW domain superfamily	Homologous Superfamily
A, B	IPR020590	Guanylate kinase, conserved site	Conserved Site
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B	IPR036034	PDZ superfamily	Homologous Superfamily
A, B	IPR008144	Guanylate kinase-like domain	Domain
A, B	IPR001478	PDZ domain	Domain
A, B	IPR001202	WW domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q96QZ7	acute myeloid leukemia squamous cell carcinoma malignant mesothelioma Neoplasm Invasiveness liver cancer osteoporosis liver neoplasm malignant pancreatic neoplasm medulloblastoma pancreatic ductal adenocarcinoma pilocytic astrocytoma Duchenne muscular dystrophy lung benign neoplasm malignant ependymoma oral cavity neoplasm acute myeloid leukemia squamous cell carcinoma malignant mesothelioma Neoplasm Invasiveness liver cancer osteoporosis liver neoplasm malignant pancreatic neoplasm medulloblastoma pancreatic ductal adenocarcinoma pilocytic astrocytoma Duchenne muscular dystrophy lung benign neoplasm malignant ependymoma oral cavity neoplasm atypical teratoid rhabdoid tumor pancreatic intraductal papillary-mucinous carcinoma pituitary cancer glioblastoma juvenile dermatomyositis lung carcinoma malignant glioma mammary neoplasms, animal myopathy Becker muscular dystrophy ovarian cancer chronic kidney disease pancreatic intraductal papillary-mucinous neoplasm drug-induced liver injury plasma cell myeloma subependymal giant cell astrocytoma limb-girdle muscular dystrophy salivary gland adenoid cystic carcinoma adenoid cystic carcinoma ovarian cancer pilocytic astrocytoma bipolar disorder cutaneous lupus erythematosus glioblastoma invasive ductal breast carcinoma major affective disorder 2 medulloblastoma pancreatic intraductal papillary-mucinous carcinoma pituitary cancer schizophrenia adrenal cortex carcinoma breast cancer ductal breast carcinoma in situ idiopathic scoliosis large cell medulloblastoma malignant ependymoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor Crohn disease gastric carcinoma ileocolitis lung adenocarcinoma malignant glioma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.