7P5Z

Structure of a DNA-loaded MCM double hexamer engaged with the Dbf4-dependent kinase


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 2]PF17207e7p5z22 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
A [auth 2]PF17855e7p5z23 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
A [auth 2]PF14551e7p5z25 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
A [auth 2]PF00493e7p5z24 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
A [auth 2]F_UNCLASSIFIEDe7p5z21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
G [auth A]PF17207e7p5zA3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
G [auth A]PF17855e7p5zA4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
G [auth A]PF14551e7p5zA5 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
G [auth A]PF00493e7p5zA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
G [auth A]F_UNCLASSIFIEDe7p5zA1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
I [auth C]PF17207e7p5zC4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
I [auth C]PF17855e7p5zC5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
I [auth C]PF14551e7p5zC2 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
I [auth C]PF00493e7p5zC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
I [auth C]PF17207e7p5zC3 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
C [auth 4]PF17207e7p5z41 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
C [auth 4]PF17855e7p5z45 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
C [auth 4]PF14551e7p5z44 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
C [auth 4]PF00493e7p5z42 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
C [auth 4]PF17207e7p5z43 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
B [auth 3]PF17207e7p5z35 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
B [auth 3]PF17855e7p5z33 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
B [auth 3]PF14551e7p5z31 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
B [auth 3]PF00493e7p5z32 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
B [auth 3]F_UNCLASSIFIEDe7p5z34 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
H [auth B]PF17207e7p5zB5 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
H [auth B]PF17855e7p5zB2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
H [auth B]PF14551e7p5zB1 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
H [auth B]PF00493e7p5zB3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
H [auth B]F_UNCLASSIFIEDe7p5zB4 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
E [auth 6]PF17207e7p5z63 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
E [auth 6]PF17855e7p5z62 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
E [auth 6]PF14551e7p5z65 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
E [auth 6]PF00493e7p5z64 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
E [auth 6]PF17207e7p5z61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
K [auth E]PF17207e7p5zE4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
K [auth E]PF17855e7p5zE2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
K [auth E]PF14551e7p5zE1 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
K [auth E]PF00493e7p5zE3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
K [auth E]PF17207e7p5zE5 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
F [auth 7]PF17207e7p5z73 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
F [auth 7]PF17855e7p5z72 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
F [auth 7]PF14551e7p5z75 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
F [auth 7]PF00493e7p5z74 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
F [auth 7]F_UNCLASSIFIEDe7p5z71 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
L [auth F]PF17207e7p5zF1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
L [auth F]PF17855e7p5zF5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
L [auth F]PF14551e7p5zF4 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
L [auth F]PF00493e7p5zF3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
L [auth F]F_UNCLASSIFIEDe7p5zF2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
M [auth 1]PF00069e7p5z11 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 2],
G [auth A]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
A [auth 2],
G [auth A]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
A [auth 2],
G [auth A]
PF12619Mini-chromosome maintenance protein 2 (MCM2_N)Mini-chromosome maintenance protein 2- Family
A [auth 2],
G [auth A]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
A [auth 2],
G [auth A]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
C [auth 4],
I [auth C]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
C [auth 4],
I [auth C]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
C [auth 4],
I [auth C]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
C [auth 4],
I [auth C]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
B [auth 3],
H [auth B]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
B [auth 3],
H [auth B]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
B [auth 3],
H [auth B]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
B [auth 3],
H [auth B]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
D [auth 5],
J [auth D]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
D [auth 5],
J [auth D]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
D [auth 5],
J [auth D]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
E [auth 6],
K [auth E]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
E [auth 6],
K [auth E]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
E [auth 6],
K [auth E]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
E [auth 6],
K [auth E]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
F [auth 7],
L [auth F]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
F [auth 7],
L [auth F]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
F [auth 7],
L [auth F]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
F [auth 7],
L [auth F]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2],
G [auth A]
DNA replication licensing factor MCM2
C [auth 4],
I [auth C]
DNA replication licensing factor MCM4
N [auth G]DDK kinase regulatory subunit DBF4
P [auth Y]DNA (53-MER)---
B [auth 3],
H [auth B]
DNA replication licensing factor MCM3
D [auth 5],
J [auth D]
Minichromosome maintenance protein 5
E [auth 6],
K [auth E]
DNA replication licensing factor MCM6
F [auth 7],
L [auth F]
DNA replication licensing factor MCM7
M [auth 1]Cell division control protein 7
O [auth X]DNA (53-MER)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 2],
G [auth A]
IPR031327Mini-chromosome maintenance proteinFamily
A [auth 2],
G [auth A]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
A [auth 2],
G [auth A]
IPR001208MCM domainDomain
A [auth 2],
G [auth A]
IPR041562MCM, AAA-lid domainDomain
A [auth 2],
G [auth A]
IPR008045DNA replication licensing factor Mcm2Family
A [auth 2],
G [auth A]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth 2],
G [auth A]
IPR027925MCM, N-terminal domainDomain
A [auth 2],
G [auth A]
IPR033762MCM OB domainDomain
A [auth 2],
G [auth A]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 4],
I [auth C]
IPR031327Mini-chromosome maintenance proteinFamily
C [auth 4],
I [auth C]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
C [auth 4],
I [auth C]
IPR001208MCM domainDomain
C [auth 4],
I [auth C]
IPR041562MCM, AAA-lid domainDomain
C [auth 4],
I [auth C]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth 4],
I [auth C]
IPR027925MCM, N-terminal domainDomain
C [auth 4],
I [auth C]
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
C [auth 4],
I [auth C]
IPR008047Mini-chromosome maintenance complex protein 4Family
C [auth 4],
I [auth C]
IPR033762MCM OB domainDomain
C [auth 4],
I [auth C]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth G]IPR013939Regulatory subunit Dfp1/Him1, central regionDomain
N [auth G]IPR006572Zinc finger, DBF-typeDomain
N [auth G]IPR038545DBF-type zinc finger superfamilyHomologous Superfamily
N [auth G]IPR036420BRCT domain superfamilyHomologous Superfamily
B [auth 3],
H [auth B]
IPR031327Mini-chromosome maintenance proteinFamily
B [auth 3],
H [auth B]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
B [auth 3],
H [auth B]
IPR003593AAA+ ATPase domainDomain
B [auth 3],
H [auth B]
IPR001208MCM domainDomain
B [auth 3],
H [auth B]
IPR041562MCM, AAA-lid domainDomain
B [auth 3],
H [auth B]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 3],
H [auth B]
IPR027925MCM, N-terminal domainDomain
B [auth 3],
H [auth B]
IPR008046DNA replication licensing factor Mcm3Family
B [auth 3],
H [auth B]
IPR033762MCM OB domainDomain
B [auth 3],
H [auth B]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth 5],
J [auth D]
IPR031327Mini-chromosome maintenance proteinFamily
D [auth 5],
J [auth D]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
D [auth 5],
J [auth D]
IPR001208MCM domainDomain
D [auth 5],
J [auth D]
IPR041562MCM, AAA-lid domainDomain
D [auth 5],
J [auth D]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth 5],
J [auth D]
IPR027925MCM, N-terminal domainDomain
D [auth 5],
J [auth D]
IPR033762MCM OB domainDomain
D [auth 5],
J [auth D]
IPR008048DNA replication licensing factor Mcm5Family
D [auth 5],
J [auth D]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth 6],
K [auth E]
IPR008049DNA replication licensing factor Mcm6Family
E [auth 6],
K [auth E]
IPR041024Mcm6, C-terminal winged-helix domainDomain
E [auth 6],
K [auth E]
IPR031327Mini-chromosome maintenance proteinFamily
E [auth 6],
K [auth E]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
E [auth 6],
K [auth E]
IPR001208MCM domainDomain
E [auth 6],
K [auth E]
IPR041562MCM, AAA-lid domainDomain
E [auth 6],
K [auth E]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth 6],
K [auth E]
IPR027925MCM, N-terminal domainDomain
E [auth 6],
K [auth E]
IPR033762MCM OB domainDomain
E [auth 6],
K [auth E]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth 7],
L [auth F]
IPR031327Mini-chromosome maintenance proteinFamily
F [auth 7],
L [auth F]
IPR008050DNA replication licensing factor Mcm7Family
F [auth 7],
L [auth F]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
F [auth 7],
L [auth F]
IPR003593AAA+ ATPase domainDomain
F [auth 7],
L [auth F]
IPR001208MCM domainDomain
F [auth 7],
L [auth F]
IPR041562MCM, AAA-lid domainDomain
F [auth 7],
L [auth F]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth 7],
L [auth F]
IPR027925MCM, N-terminal domainDomain
F [auth 7],
L [auth F]
IPR033762MCM OB domainDomain
F [auth 7],
L [auth F]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth 1]IPR000719Protein kinase domainDomain
M [auth 1]IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
M [auth 1]IPR008271Serine/threonine-protein kinase, active siteActive Site