7OYC

Cryo-EM structure of the Xenopus egg 80S ribosome


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 11]PF01287e7oyc111 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01287ECOD (1.6)
A [auth 11]PF21485e7oyc112 A: beta barrelsX: SH3H: SH3T: SH3F: PF21485ECOD (1.6)
J [auth C1]PF00573,PF14374e7oycC12 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573,PF14374ECOD (1.6)
J [auth C1]PF14374e7oycC11 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
K [auth C2]PF03719e7oycC21 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
K [auth C2]PF00333e7oycC22 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
K [auth C2]PF00333e7oycC23 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
L [auth D1]PF14204,PF17144e7oycD11 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
M [auth D2]PF00189e7oycD22 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
M [auth D2]PF07650e7oycD21 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
N [auth E1]PF01159,PF03868e7oycE11 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
O [auth E2]PF00900e7oycE23 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
O [auth E2]PF00467,PF16121e7oycE21 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
O [auth E2]PF00900,PF01479,PF08071e7oycE22 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
P [auth F1]PF00327,PF08079e7oycF11 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
Q [auth F2]PF00177e7oycF21 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
R [auth G1]PF01248e7oycG11 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
S [auth G2]PF01092e7oycG21 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
T [auth H1]PF00347e7oycH11 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
U [auth H2]PF01251e7oycH22 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
V [auth I1]PF00252e7oycI11 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
W [auth I2]PF01201e7oycI21 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
X [auth J1]PF00281,PF00673e7oycJ11 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
Y [auth J2]PF00163,PF01479e7oycJ21 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
Z [auth K2]PF03501e7oycK21 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
AA [auth L1]PF01294e7oycL11 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
BA [auth L2]PF00366,PF16205e7oycL21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
CA [auth M1]PF01929e7oycM11 A: beta barrelsX: SH3H: SH3T: SH3F: PF01929ECOD (1.6)
DA [auth N1]PF00827e7oycN11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
EA [auth N2]PF08069e7oycN22 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
EA [auth N2]PF00312e7oycN21 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
FA [auth O1]PF00572e7oycO11 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
GA [auth O2]PF00411e7oycO21 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
HA [auth P1]PF00237e7oycP11 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
IA [auth P2]PF00203e7oycP21 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
JA [auth Q1]PF17135e7oycQ11 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
KA [auth Q2]PF00380e7oycQ21 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
LA [auth R1]PF01280e7oycR12 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
LA [auth R1]PF01280e7oycR11 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
MA [auth R2]PF00833e7oycR21 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
NA [auth S1]F_UNCLASSIFIEDe7oycS12 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
NA [auth S1]PF01775e7oycS11 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
OA [auth S2]PF00416e7oycS21 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
PA [auth T1]PF01157e7oycT11 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
QA [auth T2]PF01090e7oycT21 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
RA [auth U1]PF01776e7oycU11 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
SA [auth U2]PF00338e7oycU21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
TA [auth V1]PF00238e7oycV11 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
UA [auth V2]PF01249e7oycV21 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
VA [auth W1]PF01246e7oycW11 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
WA [auth W2]PF00410e7oycW21 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
WA [auth W2]PF00410e7oycW22 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
XA [auth X1]PF00276,PF03939e7oycX11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
YA [auth X2]PF00164e7oycX21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
ZA [auth Y1]PF16906e7oycY11 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
AB [auth Y2]PF01282e7oycY21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
BB [auth Z1]PF00467,PF01777e7oycZ11 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
CB [auth Z2]PF03297e7oycZ21 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
DB [auth a1]PF00828e7oyca11 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
EB [auth a2]PF01283e7oyca21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
FB [auth b1]PF01779e7oycb11 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
GB [auth b2]PF01667e7oycb21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
F [auth A1]PF00181e7oycA11 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
F [auth A1]PF03947e7oycA12 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
HB [auth c1]PF01248e7oycc11 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
IB [auth c2]PF01200e7oycc21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
JB [auth d1]PF01198e7oycd11 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
KB [auth d2]PF00253e7oycd21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
LB [auth e1]PF01655e7oyce11 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
MB [auth e2]PF04758e7oyce21 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
NB [auth f1]PF01247e7oycf11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
OB [auth g1]PF01199e7oycg11 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
PB [auth g2]PF00400e7oycg21 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
QB [auth h1]PF00831e7oych11 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
G [auth A2]PF00318e7oycA21 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
RB [auth i1]PF01158e7oyci11 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
TB [auth j1]PF01907e7oycj11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
UB [auth k1]PF01781e7oyck11 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
VB [auth l1]PF00832e7oycl11 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
WB [auth m1]PF01020e7oycm11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
XB [auth n1]PF05162e7oycn11 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
YB [auth o1]PF00935e7oyco11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
ZB [auth p1]PF01780e7oycp11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
AC [auth r1]PF01778e7oycr11 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
H [auth B1]PF00297e7oycB11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
CC [auth v2]PF03764e7oycv21 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03764ECOD (1.6)
CC [auth v2]PF00679e7oycv22 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF00679ECOD (1.6)
CC [auth v2]PF14492e7oycv23 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF14492ECOD (1.6)
I [auth B2]PF01015e7oycB21 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
I [auth B2]PF01015e7oycB22 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 11]PF21485Translation initiation factor 5A-like, N-terminal (IF5A-like_N)Translation initiation factor 5A-like, N-terminalThis is the N-terminal domain of Translation initiation factor 5A from eukaryotes and archaea, which has a SH2-like fold. These proteins are involved in translation elongation and eIF5A is specifically required to promote peptide-bond formation betwe ...This is the N-terminal domain of Translation initiation factor 5A from eukaryotes and archaea, which has a SH2-like fold. These proteins are involved in translation elongation and eIF5A is specifically required to promote peptide-bond formation between consecutive proline residues [1-5]. This entry also includes Woronin body major protein Hex1, which is similar to eIF5A.
Domain
A [auth 11]PF01287Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold (eIF-5a)Eukaryotic elongation factor 5A hypusine, DNA-binding OB foldeIF5A, previously thought to be an initiation factor, has been shown to be required for peptide chain elongation in yeast [1].Domain
J [auth C1]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
J [auth C1]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
K [auth C2]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
K [auth C2]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
L [auth D1]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
L [auth D1]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
M [auth D2]PF07650KH domain (KH_2)KH domain- Domain
M [auth D2]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
N [auth E1]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
N [auth E1]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
O [auth E2]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
O [auth E2]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
O [auth E2]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
O [auth E2]PF00467KOW motif (KOW)KOW motif- Family
P [auth F1]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
P [auth F1]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
Q [auth F2]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
S [auth G2]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
U [auth H2]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
V [auth I1]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
W [auth I2]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
X [auth J1]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
X [auth J1]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
Y [auth J2]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
Y [auth J2]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
Z [auth K2]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
AA [auth L1]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
BA [auth L2]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
BA [auth L2]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
CA [auth M1]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
DA [auth N1]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
EA [auth N2]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
EA [auth N2]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
FA [auth O1]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
HA [auth P1]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
IA [auth P2]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
KA [auth Q2]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
LA [auth R1]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
MA [auth R2]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
NA [auth S1]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
OA [auth S2]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
PA [auth T1]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
QA [auth T2]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
RA [auth U1]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
SA [auth U2]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
TA [auth V1]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
UA [auth V2]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
VA [auth W1]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
WA [auth W2]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
XA [auth X1]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
XA [auth X1]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
YA [auth X2]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
AB [auth Y2]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
BB [auth Z1]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
BB [auth Z1]PF00467KOW motif (KOW)KOW motif- Family
CB [auth Z2]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
DB [auth a1]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
EB [auth a2]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
FB [auth b1]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
GB [auth b2]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
HB [auth c1]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
IB [auth c2]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
JB [auth d1]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
LB [auth e1]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
MB [auth e2]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
NB [auth f1]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
OB [auth g1]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
PB [auth g2]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
QB [auth h1]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
G [auth A2]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
G [auth A2]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
RB [auth i1]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
TB [auth j1]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
UB [auth k1]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
VB [auth l1]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
WB [auth m1]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
YB [auth o1]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
ZB [auth p1]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
AC [auth r1]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
H [auth B1]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
BC [auth s1]PF15228Death-associated protein (DAP)Death-associated protein- Family
CC [auth v2]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.Domain
CC [auth v2]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].Domain
CC [auth v2]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.Domain
I [auth B2]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 11]Eukaryotic translation initiation factor 5A
J [auth C1]60S ribosomal protein L4-B
K [auth C2]40S ribosomal protein S2
L [auth D1]Rpl5-b protein
M [auth D2]DNA-(apurinic or apyrimidinic site) lyase
N [auth E1]60S ribosomal protein L6
O [auth E2]40S ribosomal protein S4
P [auth F1]MGC130910 protein
Q [auth F2]Ribosomal_S7 domain-containing protein
R [auth G1]60S ribosomal protein L7a
S [auth G2]40S ribosomal protein S6
B [auth 22]18S rRNA---
T [auth H1]60S ribosomal protein L9---
U [auth H2]40S ribosomal protein S7
V [auth I1]Ribosomal_L16 domain-containing protein
W [auth I2]40S ribosomal protein S8
X [auth J1]60S ribosomal protein L11---
Y [auth J2]40S ribosomal protein S9
Z [auth K2]40S ribosomal protein S10 -
AA [auth L1]60S ribosomal protein L13
BA [auth L2]40S ribosomal protein S11
CA [auth M1]60S ribosomal protein L14
C [auth 51]28S rRNA---
DA [auth N1]Ribosomal protein L15
EA [auth N2]40S ribosomal protein S13
FA [auth O1]60S ribosomal protein L13a
GA [auth O2]Rps14---
HA [auth P1]60S ribosomal protein L17
IA [auth P2]40S ribosomal protein S15
JA [auth Q1]Ribosomal_L18e/L15P domain-containing protein---
KA [auth Q2]Rps16 protein
LA [auth R1]60S ribosomal protein L19
MA [auth R2]40S ribosomal protein S17
D [auth 71]5S rRNA---
NA [auth S1]60S ribosomal protein L18a
OA [auth S2]40S ribosomal protein S18
PA [auth T1]60S ribosomal protein L21
QA [auth T2]40S ribosomal protein S19
RA [auth U1]60S ribosomal protein L22
SA [auth U2]40S ribosomal protein S20
TA [auth V1]60S ribosomal protein L23
UA [auth V2]40S ribosomal protein S21
VA [auth W1]TRASH domain-containing protein
WA [auth W2]40S ribosomal protein S15a
E [auth 81]5.8S rRNA---
XA [auth X1]Ribosomal_L23eN domain-containing protein
YA [auth X2]40S ribosomal protein S23
ZA [auth Y1]KOW domain-containing protein---
AB [auth Y2]40S ribosomal protein S24
BB [auth Z1]60S ribosomal protein L27
CB [auth Z2]40S ribosomal protein S25 -
DB [auth a1]60S ribosomal protein L27a
EB [auth a2]40S ribosomal protein S26
FB [auth b1]60S ribosomal protein L29
GB [auth b2]40S ribosomal protein S27
F [auth A1]60S ribosomal protein L8---
HB [auth c1]60S ribosomal protein L30 -
IB [auth c2]40S ribosomal protein S28
JB [auth d1]60S ribosomal protein L31
KB [auth d2]40S ribosomal protein S29---
LB [auth e1]Rpl32
MB [auth e2]40S ribosomal protein S30
NB [auth f1]60S ribosomal protein L35a
OB [auth g1]60S ribosomal protein L34
PB [auth g2]Gnb2l1-prov protein
QB [auth h1]60S ribosomal protein L35
G [auth A2]40S ribosomal protein SA
RB [auth i1]60S ribosomal protein L36
SB [auth i2]HABP4_PAI-RBP1 domain-containing protein---
TB [auth j1]Ribosomal protein L37
UB [auth k1]60S ribosomal protein L38
VB [auth l1]MGC116452 protein
WB [auth m1]60S ribosomal protein L40
XB [auth n1]Rpl41---
YB [auth o1]MGC85428 protein
ZB [auth p1]Rpl37a
AC [auth r1]60S ribosomal protein L28
H [auth B1]Rpl3-prov protein
BC [auth s1]Death-associated protein-like 1-B -
CC [auth v2]Eef2-prov protein -
I [auth B2]40S ribosomal protein S3a-A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 11]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
A [auth 11]IPR020189Translation elongation factor, IF5A C-terminalDomain
A [auth 11]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
A [auth 11]IPR019769Translation elongation factor, IF5A, hypusine sitePTM
A [auth 11]IPR001884Translation elongation factor IF5A-likeFamily
A [auth 11]IPR048670Translation initiation factor 5A-like, N-terminalDomain
A [auth 11]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth C1]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
J [auth C1]IPR002136Large ribosomal subunit protein uL4Family
J [auth C1]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
J [auth C1]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
J [auth C1]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
K [auth C2]IPR000851Small ribosomal subunit protein uS5Family
K [auth C2]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
K [auth C2]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
K [auth C2]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
K [auth C2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
K [auth C2]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
K [auth C2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
L [auth D1]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
L [auth D1]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
M [auth D2]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
M [auth D2]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
M [auth D2]IPR004044K Homology domain, type 2Domain
M [auth D2]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
M [auth D2]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
M [auth D2]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
M [auth D2]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
N [auth E1]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
N [auth E1]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
N [auth E1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
N [auth E1]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
N [auth E1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth E1]IPR000915Large ribosomal subunit protein eL6Family
O [auth E2]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
O [auth E2]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
O [auth E2]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
O [auth E2]IPR002942RNA-binding S4 domainDomain
O [auth E2]IPR013845Small ribosomal subunit protein eS4, central regionDomain
O [auth E2]IPR000876Small ribosomal subunit protein eS4Family
O [auth E2]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth E2]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
O [auth E2]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
O [auth E2]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
O [auth E2]IPR005824KOWDomain
P [auth F1]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
P [auth F1]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
P [auth F1]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
P [auth F1]IPR039699Large ribosomal subunit protein uL30Family
P [auth F1]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
P [auth F1]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
P [auth F1]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
Q [auth F2]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
Q [auth F2]IPR000235Small ribosomal subunit protein uS7Family
Q [auth F2]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
Q [auth F2]IPR023798Small ribosomal subunit protein uS7 domainDomain
Q [auth F2]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
R [auth G1]IPR001921Large ribosomal subunit protein eL8Family
R [auth G1]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
R [auth G1]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
R [auth G1]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
R [auth G1]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
S [auth G2]IPR014401Small ribosomal subunit protein eS6-likeFamily
S [auth G2]IPR001377Small ribosomal subunit protein eS6Family
S [auth G2]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
U [auth H2]IPR000554Small ribosomal subunit protein eS7Family
U [auth H2]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
V [auth I1]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
V [auth I1]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
V [auth I1]IPR016180Large ribosomal subunit protein uL16 domainDomain
V [auth I1]IPR047873Large ribosomal subunit protein uL16Family
V [auth I1]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
W [auth I2]IPR001047Small ribosomal subunit protein eS8Family
W [auth I2]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
W [auth I2]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
Y [auth J2]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
Y [auth J2]IPR002942RNA-binding S4 domainDomain
Y [auth J2]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
Y [auth J2]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
Y [auth J2]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
Y [auth J2]IPR022801Small ribosomal subunit protein uS4Family
Z [auth K2]IPR037447Small ribosomal subunit protein eS10Family
Z [auth K2]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Z [auth K2]IPR005326Plectin/eS10, N-terminalDomain
AA [auth L1]IPR001380Large ribosomal subunit protein eL13Family
AA [auth L1]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
BA [auth L2]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
BA [auth L2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
BA [auth L2]IPR000266Small ribosomal subunit protein uS17Family
BA [auth L2]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
BA [auth L2]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
CA [auth M1]IPR039660Large ribosomal subunit protein eL14Family
CA [auth M1]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
CA [auth M1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth M1]IPR002784Large ribosomal subunit protein eL14 domainDomain
CA [auth M1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth N1]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
DA [auth N1]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
DA [auth N1]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
DA [auth N1]IPR000439Large ribosomal subunit protein eL15Family
EA [auth N2]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
EA [auth N2]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
EA [auth N2]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
EA [auth N2]IPR000589Small ribosomal subunit protein uS15Family
FA [auth O1]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
FA [auth O1]IPR005822Large ribosomal subunit protein uL13Family
FA [auth O1]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
FA [auth O1]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
HA [auth P1]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
HA [auth P1]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
HA [auth P1]IPR001063Large ribosomal subunit protein uL22Family
HA [auth P1]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
IA [auth P2]IPR002222Small ribosomal subunit protein uS19Family
IA [auth P2]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
IA [auth P2]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
IA [auth P2]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
KA [auth Q2]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
KA [auth Q2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
KA [auth Q2]IPR000754Small ribosomal subunit protein uS9Family
KA [auth Q2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
LA [auth R1]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
LA [auth R1]IPR039547Large ribosomal subunit protein eL19Family
LA [auth R1]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
LA [auth R1]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
LA [auth R1]IPR000196Large ribosomal subunit protein eL19 domainDomain
LA [auth R1]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
MA [auth R2]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
MA [auth R2]IPR001210Small ribosomal subunit protein eS17Family
MA [auth R2]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
NA [auth S1]IPR028877Large ribosomal subunit protein eL20Family
NA [auth S1]IPR023573Large ribosomal subunit protein eL20 domainDomain
NA [auth S1]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
OA [auth S2]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
OA [auth S2]IPR001892Small ribosomal subunit protein uS13Family
OA [auth S2]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
OA [auth S2]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
PA [auth T1]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
PA [auth T1]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
PA [auth T1]IPR001147Large ribosomal subunit protein eL21Family
PA [auth T1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
QA [auth T2]IPR001266Small ribosomal subunit protein eS19Family
QA [auth T2]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
QA [auth T2]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
QA [auth T2]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
RA [auth U1]IPR002671Large ribosomal subunit protein eL22Family
RA [auth U1]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
SA [auth U2]IPR001848Small ribosomal subunit protein uS10Family
SA [auth U2]IPR027486Small ribosomal subunit protein uS10 domainDomain
SA [auth U2]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
SA [auth U2]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
SA [auth U2]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
TA [auth V1]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
TA [auth V1]IPR000218Large ribosomal subunit protein uL14Family
TA [auth V1]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
UA [auth V2]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
UA [auth V2]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
UA [auth V2]IPR001931Small ribosomal subunit protein eS21Family
VA [auth W1]IPR011017TRASH domainDomain
VA [auth W1]IPR000988Large ribosomal subunit protein eL24-relatedFamily
VA [auth W1]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
VA [auth W1]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
WA [auth W2]IPR000630Small ribosomal subunit protein uS8Family
WA [auth W2]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
WA [auth W2]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
XA [auth X1]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XA [auth X1]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
XA [auth X1]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
XA [auth X1]IPR019985Large ribosomal subunit protein uL23Family
XA [auth X1]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
XA [auth X1]IPR013025Large ribosomal subunit protein uL23-likeFamily
YA [auth X2]IPR006032Small ribosomal subunit protein uS12Family
YA [auth X2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
YA [auth X2]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
AB [auth Y2]IPR001976Small ribosomal subunit protein eS24Family
AB [auth Y2]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AB [auth Y2]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
BB [auth Z1]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BB [auth Z1]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BB [auth Z1]IPR005824KOWDomain
BB [auth Z1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BB [auth Z1]IPR001141Large ribosomal subunit protein eL27Family
BB [auth Z1]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
CB [auth Z2]IPR004977Small ribosomal subunit protein eS25Family
DB [auth a1]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
DB [auth a1]IPR021131Large ribosomal subunit protein uL15/eL18Domain
DB [auth a1]IPR030878Large ribosomal subunit protein uL15Family
DB [auth a1]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
DB [auth a1]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
EB [auth a2]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
EB [auth a2]IPR000892Small ribosomal subunit protein eS26Family
EB [auth a2]IPR047864Ribosomal protein eS26, conserved siteConserved Site
FB [auth b1]IPR002673Large ribosomal subunit protein eL29Family
GB [auth b2]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
GB [auth b2]IPR000592Small ribosomal subunit protein eS27Family
GB [auth b2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HB [auth c1]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
HB [auth c1]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
HB [auth c1]IPR000231Large ribosomal subunit protein eL30Family
HB [auth c1]IPR039109Large ribosomal subunit protein eL30-likeFamily
HB [auth c1]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IB [auth c2]IPR028626Ribosomal protein eS28 conserved siteConserved Site
IB [auth c2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IB [auth c2]IPR000289Small ribosomal subunit protein eS28Family
JB [auth d1]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
JB [auth d1]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
JB [auth d1]IPR000054Large ribosomal subunit protein eL31Family
LB [auth e1]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
LB [auth e1]IPR001515Large ribosomal subunit protein eL32Family
LB [auth e1]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
MB [auth e2]IPR039415Ubiquitin-like protein FUBIDomain
MB [auth e2]IPR019956Ubiquitin domainDomain
MB [auth e2]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
MB [auth e2]IPR000626Ubiquitin-like domainDomain
MB [auth e2]IPR006846Small ribosomal subunit protein eS30Family
NB [auth f1]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
NB [auth f1]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
NB [auth f1]IPR001780Large ribosomal subunit protein eL33Family
NB [auth f1]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
OB [auth g1]IPR008195Large ribosomal subunit protein eL34Family
OB [auth g1]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
PB [auth g2]IPR019775WD40 repeat, conserved siteConserved Site
PB [auth g2]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
PB [auth g2]IPR045223Small ribosomal subunit protein RACK1-likeFamily
PB [auth g2]IPR001680WD40 repeatRepeat
PB [auth g2]IPR020472G-protein beta WD-40 repeatRepeat
PB [auth g2]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
QB [auth h1]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
QB [auth h1]IPR001854Large ribosomal subunit protein uL29Family
QB [auth h1]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
QB [auth h1]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
G [auth A2]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
G [auth A2]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
G [auth A2]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
G [auth A2]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
G [auth A2]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
G [auth A2]IPR001865Small ribosomal subunit protein uS2Family
G [auth A2]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
RB [auth i1]IPR000509Large ribosomal subunit protein eL36Family
RB [auth i1]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
TB [auth j1]IPR001569Large ribosomal subunit protein eL37Family
TB [auth j1]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
TB [auth j1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
TB [auth j1]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
UB [auth k1]IPR002675Large ribosomal subunit protein eL38Family
UB [auth k1]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
VB [auth l1]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
VB [auth l1]IPR000077Large ribosomal subunit protein eL39Family
VB [auth l1]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
WB [auth m1]IPR019954Ubiquitin conserved siteConserved Site
WB [auth m1]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
WB [auth m1]IPR000626Ubiquitin-like domainDomain
WB [auth m1]IPR019956Ubiquitin domainDomain
WB [auth m1]IPR001975Large ribosomal subunit protein eL40 domainDomain
WB [auth m1]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
YB [auth o1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YB [auth o1]IPR000552Large ribosomal subunit protein eL42Family
ZB [auth p1]IPR002674Large ribosomal subunit protein eL43Family
ZB [auth p1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth p1]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
AC [auth r1]IPR029004Ribosomal eL28/Mak16Domain
AC [auth r1]IPR002672Large ribosomal subunit protein eL28Family
H [auth B1]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
H [auth B1]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
H [auth B1]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
H [auth B1]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
H [auth B1]IPR000597Large ribosomal subunit protein uL3Family
BC [auth s1]IPR024130DAP1/DAPL1Family
CC [auth v2]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
CC [auth v2]IPR000795Translational (tr)-type GTP-binding domainDomain
CC [auth v2]IPR000640Elongation factor EFG, domain V-likeDomain
CC [auth v2]IPR031157Tr-type G domain, conserved siteConserved Site
CC [auth v2]IPR035647EF-G domain III/V-likeHomologous Superfamily
CC [auth v2]IPR041095Elongation Factor G, domain IIDomain
CC [auth v2]IPR004161Translation elongation factor EFTu-like, domain 2Domain
CC [auth v2]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
CC [auth v2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
CC [auth v2]IPR005225Small GTP-binding protein domainDomain
CC [auth v2]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
CC [auth v2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
I [auth B2]IPR001593Small ribosomal subunit protein eS1Family
I [auth B2]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
I [auth B2]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily