7OVR

Mature HIV-1 matrix structure

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00540e7ovrA1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
EPF00540e7ovrE1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
G [auth H]PF00540e7ovrH1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
H [auth I]PF00540e7ovrI1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
K [auth P]PF00540e7ovrP1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
M [auth R]PF00540e7ovrR1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
O [auth U]PF00540e7ovrU1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
Q [auth Y]PF00540e7ovrY1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
U [auth e]PF00540e7ovre1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
BPF00540e7ovrB1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
CPF00540e7ovrC1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
DPF00540e7ovrD1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
FPF00540e7ovrF1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
I [auth J]PF00540e7ovrJ1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
J [auth O]PF00540e7ovrO1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
L [auth Q]PF00540e7ovrQ1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
N [auth S]PF00540e7ovrS1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
P [auth W]PF00540e7ovrW1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
R [auth b]PF00540e7ovrb1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
S [auth c]PF00540e7ovrc1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
T [auth d]PF00540e7ovrd1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
V [auth f]PF00540e7ovrf1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
W [auth j]PF00540e7ovrj1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
X [auth l]PF00540e7ovrl1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
C,
D,
E,
PF00540gag gene protein p17 (matrix protein) (Gag_p17)gag gene protein p17 (matrix protein)The matrix protein forms an icosahedral shell associated with the inner membrane of the mature immunodeficiency virus.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
HIV-1 matrix

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B,
C,
D,
E,
IPR000071Immunodeficiency lentiviral matrix, N-terminalDomain
A,
B,
C,
D,
E,
IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
A,
B,
C,
D,
E,
IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
A,
B,
C,
D,
E,
IPR001878Zinc finger, CCHC-typeDomain
A,
B,
C,
D,
E,
IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
A,
B,
C,
D,
E,
IPR010999Retroviral matrix proteinHomologous Superfamily
A,
B,
C,
D,
E,
IPR012344Matrix protein, lentiviral and alpha-retroviral, N-terminalHomologous Superfamily
A,
B,
C,
D,
E,
IPR014817Gag protein p6Domain
A,
B,
C,
D,
E,
IPR008916Retrovirus capsid, C-terminalHomologous Superfamily