7OM8 | pdb_00007om8

Beta2 appendage domain of AP2 bound to terminal domains beneath the hub of the 28 triskelia mini clathrin coat complex, class 15

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth B]SCOP2B SuperfamilySubdomain of clathrin and coatomer appendage domain 8036006 3000382 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyClathrin adaptor appendage domain 8055291 3002052 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth B]Alpha_adaptinC2e7om8B1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_adaptinC2ECOD (1.6)
C [auth B]B2-adapt-app_Ce7om8B2 A: a+b two layersX: TBP-likeH: Subdomain of clathrin and coatomer appendage domain (From Topology)T: Subdomain of clathrin and coatomer appendage domainF: B2-adapt-app_CECOD (1.6)
B [auth Z]Clathrin_propele7om8Z1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: Clathrin_propelECOD (1.6)
A [auth Y]Clathrin_propele7om8Y1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: Clathrin_propelECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth B]PF09066Beta2-adaptin appendage, C-terminal sub-domain (B2-adapt-app_C)Beta2-adaptin appendage, C-terminal sub-domainMembers of this family adopt a structure consisting of a 5 stranded beta-sheet, flanked by one alpha helix on the outer side, and by two alpha helices on the inner side. This domain is required for binding to clathrin, and its subsequent polymerisati ...Members of this family adopt a structure consisting of a 5 stranded beta-sheet, flanked by one alpha helix on the outer side, and by two alpha helices on the inner side. This domain is required for binding to clathrin, and its subsequent polymerisation. Furthermore, a hydrophobic patch present in the domain also binds to a subset of D-phi-F/W motif-containing proteins that are bound by the alpha-adaptin appendage domain (epsin, AP180, eps15) [1].
Domain
C [auth B]PF02883Adaptin C-terminal domain (Alpha_adaptinC2)Adaptin C-terminal domainAlpha adaptin is a heterotetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This ig-fold domain is found in alpha, beta and ...Alpha adaptin is a heterotetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This ig-fold domain is found in alpha, beta and gamma adaptins.
Domain
A [auth Y],
B [auth Z]		PF01394Clathrin propeller repeat (Clathrin_propel)Clathrin propeller repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth B]AP-2 complex subunit beta
A [auth Y],
B [auth Z]		Clathrin heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth B]IPR016024Armadillo-type foldHomologous Superfamily
C [auth B]IPR013037Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomainHomologous Superfamily
C [auth B]IPR000225ArmadilloRepeat
C [auth B]IPR026739AP complex subunit betaFamily
C [auth B]IPR011989Armadillo-like helicalHomologous Superfamily
C [auth B]IPR012295TBP domain superfamilyHomologous Superfamily
C [auth B]IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalDomain
C [auth B]IPR015151Beta-adaptin appendage, C-terminal subdomainDomain
C [auth B]IPR013041Clathrin adaptor, appendage, Ig-like subdomain superfamilyHomologous Superfamily
C [auth B]IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainDomain
C [auth B]IPR009028Coatomer/calthrin adaptor appendage, C-terminal subdomainHomologous Superfamily
C [auth B]IPR016342AP-1/2/4 complex subunit betaFamily
A [auth Y],
B [auth Z]		IPR000547Clathrin, heavy chain/VPS, 7-fold repeatRepeat
A [auth Y],
B [auth Z]		IPR016341Clathrin, heavy chainFamily
A [auth Y],
B [auth Z]		IPR015348Clathrin, heavy chain, linker, core motifDomain
A [auth Y],
B [auth Z]		IPR016024Armadillo-type foldHomologous Superfamily
A [auth Y],
B [auth Z]		IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
A [auth Y],
B [auth Z]		IPR022365Clathrin, heavy chain, propeller repeatRepeat
A [auth Y],
B [auth Z]		IPR055358Clathrin heavy-chain repeatRepeat
A [auth Y],
B [auth Z]		IPR016025Clathrin heavy chain, N-terminalHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth B]Pharos:  P63010