7OLE | pdb_00007ole

Cryo-EM structure of the TELO2-TTI1-TTI2-RUVBL1-RUVBL2 complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
FSCOP2B SuperfamilyNucleic acid-binding proteins 8039200 3000135 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyNucleic acid-binding proteins 8039200 3000135 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNucleic acid-binding proteins 8039200 3000135 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FTIP49_2nde7oleF2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: TIP49_2ndECOD (1.6)
FKOG2680_like,TIP49_3rd_1e7oleF1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG2680_like,TIP49_3rd_1ECOD (1.6)
FAAA_11_1e7oleF3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AAA_11_1ECOD (1.6)
DTIP49_2nde7oleD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: TIP49_2ndECOD (1.6)
DKOG2680_like,TIP49_3rd_1e7oleD3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG2680_like,TIP49_3rd_1ECOD (1.6)
DAAA_11_1e7oleD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AAA_11_1ECOD (1.6)
BTIP49_2nde7oleB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: TIP49_2ndECOD (1.6)
BKOG2680_like,TIP49_3rd_1e7oleB3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG2680_like,TIP49_3rd_1ECOD (1.6)
BAAA_11_1e7oleB2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AAA_11_1ECOD (1.6)
ETIP49_2nde7oleE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: TIP49_2ndECOD (1.6)
ETIP49_3rde7oleE3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: TIP49_3rdECOD (1.6)
EAAA_11_1e7oleE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AAA_11_1ECOD (1.6)
CTIP49_2nde7oleC3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: TIP49_2ndECOD (1.6)
CTIP49_3rde7oleC1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: TIP49_3rdECOD (1.6)
CAAA_11_1e7oleC2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AAA_11_1ECOD (1.6)
ATIP49_2nde7oleA3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: TIP49_2ndECOD (1.6)
ATIP49_3rde7oleA1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: TIP49_3rdECOD (1.6)
AAAA_11_1e7oleA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AAA_11_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth K]PF25320TELO2 ARM repeat domain (TELO2_ARM)TELO2 ARM repeat domain- Repeat
B, D, F
PF17856TIP49 AAA-lid domain (TIP49_C)TIP49 AAA-lid domainThis family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) ...This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway [1]. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear factors and have DNA helicase activities.TIP49a has been suggested to act as an autoantigen in some patients with autoimmune diseases [2].
Domain
A, C, E
PF06068TIP49 P-loop domain (TIP49)TIP49 P-loop domainThis family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) ...This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway [1]. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear factors and have DNA helicase activities.TIP49a has been suggested to act as an autoantigen in some patients with autoimmune diseases [2].
Domain
A, C, E
PF17856TIP49 AAA-lid domain (TIP49_C)TIP49 AAA-lid domainThis family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) ...This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway [1]. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear factors and have DNA helicase activities.TIP49a has been suggested to act as an autoantigen in some patients with autoimmune diseases [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth K]Telomere length regulation protein TEL2 homolog
H [auth J]TELO2-interacting protein 2,TELO2-interacting protein 2,TTI2-
G [auth H]TELO2-interacting protein 1 homolog,TELO2-interacting protein 1 homolog,TTI1
B, D, F
RuvB-like 2
A, C, E
RuvB-like 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth K]IPR016024Armadillo-type foldHomologous Superfamily
I [auth K]IPR057348TELO2, ARM repeat domainDomain
I [auth K]IPR038528TEL2, C-terminal domain superfamilyHomologous Superfamily
I [auth K]IPR019337Telomere length regulation protein, conserved domainDomain
I [auth K]IPR051970Telomere Length Regulation TEL2Family
H [auth J]IPR016024Armadillo-type foldHomologous Superfamily
H [auth J]IPR018870Tti2 familyFamily
G [auth H]IPR016024Armadillo-type foldHomologous Superfamily
G [auth H]IPR011989Armadillo-like helicalHomologous Superfamily
G [auth H]IPR049362TELO2-interacting protein 1, middle region repeatsRepeat
G [auth H]IPR057566TTI1, N-terminal TPR domainDomain
G [auth H]IPR016441TEL2-interacting protein 1Family
G [auth H]IPR057567TTI1, C-terminal TPR domainDomain
G [auth H]IPR052587TELO2-interacting protein 1 homologFamily
B, D, F
IPR010339TIP49, P-loop domainDomain
B, D, F
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B, D, F
IPR041048RuvB-like, AAA-lid domainDomain
B, D, F
IPR042487RuvBL1/2, DNA/RNA binding domainHomologous Superfamily
B, D, F
IPR003593AAA+ ATPase domainDomain
B, D, F
IPR027238RuvB-likeFamily
A, C, E
IPR010339TIP49, P-loop domainDomain
A, C, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, C, E
IPR041048RuvB-like, AAA-lid domainDomain
A, C, E
IPR042487RuvBL1/2, DNA/RNA binding domainHomologous Superfamily
A, C, E
IPR003593AAA+ ATPase domainDomain
A, C, E
IPR027238RuvB-likeFamily