7OLD | pdb_00007old

Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth A]SCOP2 FamilyWD40-repeat 8106187 4002744 SCOP2 (2022-06-29)
F [auth A]SCOP2 SuperfamilyWD40 repeat-like 8106188 3001694 SCOP2 (2022-06-29)
J [auth LB]SCOP2 FamilyRibosomal protein L3 8106161 4002103 SCOP2 (2022-06-29)
J [auth LB]SCOP2 SuperfamilyTranslational proteins 8106162 3000811 SCOP2 (2022-06-29)
K [auth LC]SCOP2B SuperfamilyRibosomal protein L4 8077111 3001146 SCOP2B (2022-06-29)
L [auth LD]SCOP2 FamilyRibosomal protein L5e and archael L18-like 8106193 4006591 SCOP2 (2022-06-29)
L [auth LD]SCOP2 SuperfamilyTranslational machinery components 8106194 3000571 SCOP2 (2022-06-29)
Q [auth LI]SCOP2 FamilyRibosomal protein L10e 8106197 4001135 SCOP2 (2022-06-29)
Q [auth LI]SCOP2 SuperfamilyRibosomal protein L16p/L10e 8106198 3000884 SCOP2 (2022-06-29)
V [auth LN]SCOP2 FamilyL15e 8106167 4000945 SCOP2 (2022-06-29)
V [auth LN]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8106168 3000210 SCOP2 (2022-06-29)
Z [auth LR]SCOP2 FamilyRibosomal protein L19 (L19e) 8106185 4001138 SCOP2 (2022-06-29)
Z [auth LR]SCOP2 SuperfamilyRibosomal protein L19 (L19e) 8106186 3000890 SCOP2 (2022-06-29)
OA [auth Lg]SCOP2 FamilyRibosomal protein L34e-like 8106199 4006193 SCOP2 (2022-06-29)
OA [auth Lg]SCOP2 SuperfamilyRibosomal protein L34e-like 8106200 3002203 SCOP2 (2022-06-29)
TA [auth Ll]SCOP2 Familyribosomal protein l39e 8106281 4001518 SCOP2 (2022-06-29)
TA [auth Ll]SCOP2 SuperfamilyRibosomal protein L39e 8106282 3001756 SCOP2 (2022-06-29)
UA [auth Lm]SCOP2 FamilyRibosomal protein L40e 8106183 4002847 SCOP2 (2022-06-29)
UA [auth Lm]SCOP2 SuperfamilyZn-binding ribosomal proteins 8106184 3001320 SCOP2 (2022-06-29)
XA [auth Lp]SCOP2 FamilyRibosomal protein L37ae 8106177 4003704 SCOP2 (2022-06-29)
XA [auth Lp]SCOP2 SuperfamilyZn-binding ribosomal proteins 8106178 3001320 SCOP2 (2022-06-29)
CB [auth SB]SCOP2B SuperfamilyRibosomal S3Ae-like 8094667 3002166 SCOP2B (2022-06-29)
GB [auth SF]SCOP2B SuperfamilyRibosomal protein S7 8095683 3000799 SCOP2B (2022-06-29)
LB [auth SK]SCOP2 FamilyeS10-like 8106169 4007434 SCOP2 (2022-06-29)
LB [auth SK]SCOP2 SuperfamilyWinged helix DNA-binding domain 8106170 3000034 SCOP2 (2022-06-29)
NB [auth SM]SCOP2 FamilyL30e/L7ae ribosomal proteins 8106203 4001513 SCOP2 (2022-06-29)
NB [auth SM]SCOP2 SuperfamilyL30e-like 8106204 3001739 SCOP2 (2022-06-29)
PB [auth SO]SCOP2B SuperfamilyTranslational machinery components 8095757 3000571 SCOP2B (2022-06-29)
RB [auth SQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8097794 3000100 SCOP2B (2022-06-29)
TB [auth SS]SCOP2 FamilyRibosomal protein S13 8106179 4000260 SCOP2 (2022-06-29)
TB [auth SS]SCOP2 SuperfamilyS13-like H2TH domain 8106180 3000053 SCOP2 (2022-06-29)
UB [auth ST]SCOP2B SuperfamilyWinged helix DNA-binding domain 8095685 3000034 SCOP2B (2022-06-29)
VB [auth SU]SCOP2 FamilyRibosomal protein S10 8106175 4001240 SCOP2 (2022-06-29)
VB [auth SU]SCOP2 SuperfamilyRibosomal protein S10 8106176 3001336 SCOP2 (2022-06-29)
WB [auth SV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8106206 3000068 SCOP2B (2022-06-29)
XB [auth SW]SCOP2B SuperfamilyRibosomal protein S8 8095563 3000709 SCOP2B (2022-06-29)
ZB [auth SY]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8098446 3000210 SCOP2B (2022-06-29)
BC [auth Sa]SCOP2 FamilyRibosomal protein S26e 8106173 4006236 SCOP2 (2022-06-29)
BC [auth Sa]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8106174 3000068 SCOP2 (2022-06-29)
EC [auth Sd]SCOP2 FamilyRibosomal protein S14p/S29e 8106283 4003647 SCOP2 (2022-06-29)
EC [auth Sd]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8106284 3000068 SCOP2 (2022-06-29)
FC [auth Se]SCOP2 FamilyRibosomal protein S30e-like 8106279 4005067 SCOP2 (2022-06-29)
FC [auth Se]SCOP2 SuperfamilyRibosomal protein S30e-like 8106280 3002190 SCOP2 (2022-06-29)
DC [auth Sc]SCOP2B SuperfamilyNucleic acid-binding proteins 8095187 3000135 SCOP2B (2022-06-29)
AC [auth SZ]SCOP2B SuperfamilyWinged helix DNA-binding domain 8106172 3000034 SCOP2B (2022-06-29)
BB [auth SA]SCOP2 FamilyRibosomal protein S2-like 8106163 4003744 SCOP2 (2022-06-29)
BB [auth SA]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8106164 3001397 SCOP2 (2022-06-29)
SA [auth Lk]SCOP2 FamilyRibosomal L38e protein-like 8106201 4006532 SCOP2 (2022-06-29)
SA [auth Lk]SCOP2 SuperfamilyRibosomal L38e protein-like 8106202 3002206 SCOP2 (2022-06-29)
NA [auth Lf]SCOP2 FamilyRibosomal protein L35ae 8106189 4003173 SCOP2 (2022-06-29)
NA [auth Lf]SCOP2 SuperfamilyTranslational proteins 8106190 3000811 SCOP2 (2022-06-29)
MA [auth Le]SCOP2 FamilyRibosomal protein L32e 8106181 4003517 SCOP2 (2022-06-29)
MA [auth Le]SCOP2 SuperfamilyRibosomal protein L32e 8106182 3000982 SCOP2 (2022-06-29)
KA [auth Lc]SCOP2B SuperfamilyL30e-like 8106196 3001739 SCOP2B (2022-06-29)
GA [auth LY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8106166 3000334 SCOP2B (2022-06-29)
DA [auth LV]SCOP2 FamilyRibosomal protein L14 8106207 4001826 SCOP2 (2022-06-29)
DA [auth LV]SCOP2 Superfamily50S Ribosomal protein L14-like 8106208 3000433 SCOP2 (2022-06-29)
CA [auth LU]SCOP2B Superfamily60S Ribosomal protein L22e 8106192 3002158 SCOP2B (2022-06-29)
R [auth LJ]SCOP2B SuperfamilyRL5-like 8077505 3001709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth A]ANAPC4_WD40_7e7oldA1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_7ECOD (1.6)
H [auth C]GTP_EFTU_D2e7oldC2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
H [auth C]EFG_IVe7oldC5 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: EFG_IVECOD (1.6)
H [auth C]EFG_Ce7oldC1 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
H [auth C]EFG_IIe7oldC3 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
H [auth C]MnmE_helical_2nde7oldC4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
I [auth LA]Ribosomal_L2_1e7oldLA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
I [auth LA]Ribosomal_L2_C_2e7oldLA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
J [auth LB]Ribosomal_L3e7oldLB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
K [auth LC]Ribosomal_L4e7oldLC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
K [auth LC]Ribos_L4_asso_Ce7oldLC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
L [auth LD]Ribosomal_L5ee7oldLD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
N [auth LF]Ribosomal_L30_1e7oldLF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
O [auth LG]Ribosomal_L7Ae_1e7oldLG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
P [auth LH]Ribosomal_L6_2e7oldLH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
P [auth LH]Ribosomal_L6e7oldLH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
Q [auth LI]Ribosomal_L16e7oldLI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
S [auth LK]Ribosomal_L11e7oldLK1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
S [auth LK]Ribosomal_L11_Ne7oldLK2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
T [auth LL]Ribosomal_L13ee7oldLL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
U [auth LM]Ribosomal_L14ee7oldLM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
V [auth LN]Ribosomal_L15ee7oldLN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
W [auth LO]Ribosomal_L13e7oldLO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
X [auth LP]Ribosomal_L22e7oldLP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
Y [auth LQ]Ribosomal_L18e7oldLQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
Z [auth LR]Ribosomal_L19e_Ne7oldLR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
Z [auth LR]Ribosomal_L19e_Ce7oldLR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
AA [auth LS]Ribosomal_L18Ae7oldLS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
BA [auth LT]Ribosomal_L21ee7oldLT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
EA [auth LW]Ribosomal_L24ee7oldLW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
FA [auth LX]Ribosomal_L23_3e7oldLX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
HA [auth LZ]Ribosomal_L27ee7oldLZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
IA [auth La]Ribosomal_L18e7oldLa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
JA [auth Lb]Ribosomal_L29ee7oldLb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
LA [auth Ld]Ribosomal_L31ee7oldLd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
OA [auth Lg]Ribosomal_L34ee7oldLg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
PA [auth Lh]Ribosomal_L29_2e7oldLh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
QA [auth Li]Ribosomal_L36ee7oldLi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
RA [auth Lj]Ribosomal_L37ee7oldLj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
TA [auth Ll]Ribosomal_L39e7oldLl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
UA [auth Lm]Ribosomal_L40ee7oldLm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
VA [auth Ln]Ribosomal_L41e7oldLn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
ZA [auth Lr]Ribosomal_L41e7oldLr1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
XA [auth Lp]Ribosomal_L37aee7oldLp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
YA [auth Lq]Ribosomal_L28ee7oldLq1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
AB [auth Ls]Ribosomal_L10e7oldLs2 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
AB [auth Ls]Ribosomal_P0_L10ee7oldLs1 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
CB [auth SB]Ribosomal_S3Ae_Ne7oldSB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
CB [auth SB]Ribosomal_S3Ae_Ce7oldSB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
EB [auth SD]Ribosomal_S3_Ce7oldSD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
EB [auth SD]KH_2_3e7oldSD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
FB [auth SE]Ribosomal_S4ee7oldSE3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
FB [auth SE]40S_S4_Ce7oldSE1 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
FB [auth SE]RS4NTe7oldSE2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
GB [auth SF]Ribosomal_S7_1e7oldSF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
HB [auth SG]Ribosomal_S6ee7oldSG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
JB [auth SI]Ribosomal_S8ee7oldSI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
KB [auth SJ]S4e7oldSJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
LB [auth SK]S10_plectine7oldSK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
MB [auth SL]Ribosomal_S17_1e7oldSL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
NB [auth SM]Ribosomal_L7Aee7oldSM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
OB [auth SN]Ribosomal_S13_Ne7oldSN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
OB [auth SN]Ribosomal_S15_2e7oldSN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
PB [auth SO]Ribosomal_S11e7oldSO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
RB [auth SQ]Ribosomal_S9e7oldSQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
SB [auth SR]Ribosomal_S17ee7oldSR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
TB [auth SS]Ribosomal_S13e7oldSS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
UB [auth ST]Ribosomal_S19ee7oldST1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
VB [auth SU]Ribosomal_S10_1e7oldSU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
WB [auth SV]Ribosomal_S21ee7oldSV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
XB [auth SW]Ribosomal_S8_N_1e7oldSW1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
XB [auth SW]Ribosomal_S8_C_1e7oldSW2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
ZB [auth SY]Ribosomal_S24ee7oldSY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
BC [auth Sa]Ribosomal_S26ee7oldSa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
EC [auth Sd]Ribosomal_S14_2e7oldSd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
GC [auth Sf]Ribosomal_S27e7oldSf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
FC [auth Se]Ribosomal_S30e7oldSe1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
DC [auth Sc]Ribosomal_S28ee7oldSc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
CC [auth Sb]Ribosomal_S27ee7oldSb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
AC [auth SZ]Ribosomal_S25e7oldSZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
YB [auth SX]Ribosom_S12_S23e7oldSX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
QB [auth SP]Ribosomal_S19e7oldSP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
IB [auth SH]Ribosomal_S7e_Ce7oldSH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_CECOD (1.6)
IB [auth SH]Ribosomal_S7e_Ne7oldSH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
DB [auth SC]Ribosomal_S5_C_1e7oldSC3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
DB [auth SC]Ribosomal_S5_3e7oldSC2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
DB [auth SC]Ribosomal_S5_2e7oldSC1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
BB [auth SA]Ribosomal_S2_2e7oldSA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
WA [auth Lo]Ribosomal_L44e7oldLo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
SA [auth Lk]Ribosomal_L38ee7oldLk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
NA [auth Lf]Ribosomal_L35Aee7oldLf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
MA [auth Le]Ribosomal_L32ee7oldLe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
KA [auth Lc]Ribosomal_L7Aee7oldLc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
GA [auth LY]Ribosomal_L26e7oldLY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
DA [auth LV]Ribosomal_L14e7oldLV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
CA [auth LU]Ribosomal_L22ee7oldLU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
R [auth LJ]Ribosomal_L5_Ce7oldLJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
M [auth LE]Ribosomal_L6ee7oldLE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth A]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
G [auth B]PF04774Hyaluronan / mRNA binding family (HABP4_PAI-RBP1)Hyaluronan / mRNA binding family- Family
H [auth C]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold. Domain
H [auth C]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. Domain
H [auth C]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1]. Domain
H [auth C]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
H [auth C]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold. Domain
I [auth LA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
I [auth LA]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
J [auth LB]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
K [auth LC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
K [auth LC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
L [auth LD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
L [auth LD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
L [auth LD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
N [auth LF]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
N [auth LF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
N [auth LF]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
O [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
P [auth LH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
P [auth LH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
Q [auth LI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
Q [auth LI]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
S [auth LK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
S [auth LK]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
S [auth LK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
T [auth LL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
T [auth LL]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
U [auth LM]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
U [auth LM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
V [auth LN]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
V [auth LN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
W [auth LO]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
W [auth LO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
X [auth LP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
X [auth LP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
Y [auth LQ]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
Y [auth LQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
Z [auth LR]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
Z [auth LR]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
AA [auth LS]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1]. Domain
AA [auth LS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
FA [auth LX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
HA [auth LZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
CB [auth SB]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
EB [auth SD]PF07650KH domain (KH_2)KH domainDomain
EB [auth SD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
EB [auth SD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
FB [auth SE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
FB [auth SE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
FB [auth SE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
FB [auth SE]PF00467KOW motif (KOW)KOW motif- Family
GB [auth SF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
GB [auth SF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
HB [auth SG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
JB [auth SI]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
KB [auth SJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
KB [auth SJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
LB [auth SK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
MB [auth SL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
MB [auth SL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
NB [auth SM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
OB [auth SN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
PB [auth SO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
RB [auth SQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
TB [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
UB [auth ST]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
VB [auth SU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
WB [auth SV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
XB [auth SW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
ZB [auth SY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
YB [auth SX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
QB [auth SP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
IB [auth SH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
DB [auth SC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
DB [auth SC]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28eDomain
DB [auth SC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
BB [auth SA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
GA [auth LY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
GA [auth LY]PF00467KOW motif (KOW)KOW motif- Family
DA [auth LV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
R [auth LJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
R [auth LJ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
R [auth LJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
M [auth LE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
M [auth LE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth 2]18S rRNA---
D [auth 4]5.8S rRNA---
F [auth A]Putative guanine nucleotide-binding protein -
G [auth B]HABP4_PAI-RBP1 domain-containing protein -
H [auth C]Elongation factor 2 -
I [auth LA]60S ribosomal protein L2-like protein
J [auth LB]60S ribosomal protein L3-like protein
K [auth LC]60S ribosomal protein L4-like protein
L [auth LD]60S ribosomal protein l5-like protein
N [auth LF]60S ribosomal protein l7-like protein
O [auth LG]60S ribosomal protein L8
P [auth LH]60S ribosomal protein l9-like protein
Q [auth LI]60S ribosomal protein L10-like protein
S [auth LK]60S ribosomal protein L12-like protein
T [auth LL]60S ribosomal protein L13
U [auth LM]60S ribosomal protein L14-like protein
V [auth LN]Ribosomal protein L15
W [auth LO]60S ribosomal protein L16-like protein
X [auth LP]60S ribosomal protein l17-like protein
Y [auth LQ]Ribosomal protein L18-like protein
Z [auth LR]Ribosomal protein L19
AA [auth LS]60S ribosomal protein L20
BA [auth LT]60S ribosomal protein l21-like protein
EA [auth LW]60S ribosomal protein L24-like protein
FA [auth LX]60S ribosomal protein L25-like protein
HA [auth LZ]60S ribosomal protein L27
IA [auth La]60S ribosomal protein L28-like protein---
JA [auth Lb]60S ribosomal protein L29
LA [auth Ld]Putative 60S ribosomal protein
OA [auth Lg]Ribosomal protein l34-like protein
PA [auth Lh]Dolichyl-diphosphooligosaccharide--protein glycotransferase
QA [auth Li]60S ribosomal protein L36
RA [auth Lj]Ribosomal protein L37
TA [auth Ll]Ribosomal protein eL39
UA [auth Lm]Ubiquitin
VA [auth Ln],
ZA [auth Lr]		60S ribosomal protein L41-A
XA [auth Lp]60S ribosomal protein L43-like protein
YA [auth Lq]Putative 60S ribosomal protein
AB [auth Ls]60S acidic ribosomal protein P0
CB [auth SB]40S ribosomal protein S1
EB [auth SD]40S ribosomal protein S3-like protein
FB [auth SE]40S ribosomal protein S4
GB [auth SF]40S ribosomal protein s5-like protein
HB [auth SG]40S ribosomal protein S6
JB [auth SI]40S ribosomal protein S8
KB [auth SJ]40S ribosomal protein s9-like protein
LB [auth SK]40S ribosomal protein s10-like protein -
MB [auth SL]40S ribosomal protein S11-like protein
NB [auth SM]40S ribosomal protein S12
OB [auth SN]40S ribosomal protein S13-like protein
PB [auth SO]40S ribosomal protein S14-like protein
RB [auth SQ]40S ribosomal protein S16-like protein
SB [auth SR]40S ribosomal protein S17-like protein
TB [auth SS]Putative ribosomal protein
UB [auth ST]40S ribosomal protein S19-like protein
VB [auth SU]40S ribosomal protein S20-like protein
WB [auth SV]40S ribosomal protein S21-like protein
XB [auth SW]40S ribosomal protein S22-like protein
ZB [auth SY]40S ribosomal protein S24
BC [auth Sa]40S ribosomal protein S26
EC [auth Sd]Ribosomal protein uS14
GC [auth Sf]40S ribosomal protein S27a-like protein
FC [auth Se]40S ribosomal protein S30
DC [auth Sc]40S ribosomal protein S28-like protein
CC [auth Sb]Ribosomal protein s27-like protein
AC [auth SZ]40S ribosomal protein S25- -
YB [auth SX]40S ribosomal protein s23-like protein
QB [auth SP]40S ribosomal protein s15-like protein
IB [auth SH]40S ribosomal protein S7
DB [auth SC]40S ribosomal protein S2-like protein
BB [auth SA]40S ribosomal protein S0
E [auth 5]pe/E tRNA---
WA [auth Lo]60S ribosomal protein L44-like protein
SA [auth Lk]60S ribosomal protein L38-like protein
NA [auth Lf]60S ribosomal protein l33-like protein
MA [auth Le]60S ribosomal protein L32-like protein
KA [auth Lc]60S ribosomal protein l30-like protein -
GA [auth LY]60S ribosomal protein L26-like protein
DA [auth LV]60S ribosomal protein l23-like protein
C [auth 3]5S rRNA---
CA [auth LU]60S ribosomal protein L22-like protein
R [auth LJ]Putative ribosomal protein
M [auth LE]60S ribosomal protein L6
A [auth 1]26S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth A]IPR045223Small ribosomal subunit protein RACK1-likeFamily
F [auth A]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
F [auth A]IPR001680WD40 repeatRepeat
F [auth A]IPR019775WD40 repeat, conserved siteConserved Site
F [auth A]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
F [auth A]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
G [auth B]IPR019084STM1-like, N-terminalDomain
G [auth B]IPR039764RNA binding protein HABP4/SERBP1-likeFamily
G [auth B]IPR006861Hyaluronan/mRNA-binding proteinDomain
H [auth C]IPR005225Small GTP-binding domainDomain
H [auth C]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
H [auth C]IPR000795Translational (tr)-type GTP-binding domainDomain
H [auth C]IPR000640Elongation factor EFG, domain V-likeDomain
H [auth C]IPR031157Tr-type G domain, conserved siteConserved Site
H [auth C]IPR035647EF-G domain III/V-likeHomologous Superfamily
H [auth C]IPR041095Elongation Factor G, domain IIDomain
H [auth C]IPR004161Translation elongation factor EFTu-like, domain 2Domain
H [auth C]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
H [auth C]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
H [auth C]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
H [auth C]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
I [auth LA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
I [auth LA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
I [auth LA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
I [auth LA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
I [auth LA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
I [auth LA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
I [auth LA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
I [auth LA]IPR002171Large ribosomal subunit protein uL2Family
J [auth LB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
J [auth LB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
J [auth LB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
J [auth LB]IPR000597Large ribosomal subunit protein uL3Family
J [auth LB]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
K [auth LC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
K [auth LC]IPR002136Large ribosomal subunit protein uL4Family
K [auth LC]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
K [auth LC]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
K [auth LC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
L [auth LD]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
L [auth LD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
N [auth LF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
N [auth LF]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
N [auth LF]IPR039699Large ribosomal subunit protein uL30Family
N [auth LF]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
N [auth LF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
N [auth LF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
O [auth LG]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
O [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
O [auth LG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
O [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
O [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
O [auth LG]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
P [auth LH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
P [auth LH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
P [auth LH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
P [auth LH]IPR000702Large ribosomal subunit protein uL6-likeFamily
Q [auth LI]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
Q [auth LI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
Q [auth LI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
Q [auth LI]IPR016180Large ribosomal subunit protein uL16 domainDomain
Q [auth LI]IPR047873Large ribosomal subunit protein uL16Family
S [auth LK]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
S [auth LK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
S [auth LK]IPR000911Ribosomal protein uL11Family
S [auth LK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
S [auth LK]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
S [auth LK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
T [auth LL]IPR001380Large ribosomal subunit protein eL13Family
T [auth LL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
U [auth LM]IPR039660Large ribosomal subunit protein eL14Family
U [auth LM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth LM]IPR002784Large ribosomal subunit protein eL14 domainDomain
U [auth LM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth LN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
V [auth LN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
V [auth LN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
V [auth LN]IPR000439Large ribosomal subunit protein eL15Family
W [auth LO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
W [auth LO]IPR005822Large ribosomal subunit protein uL13Family
W [auth LO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
W [auth LO]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
X [auth LP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
X [auth LP]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
X [auth LP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
X [auth LP]IPR001063Large ribosomal subunit protein uL22Family
Y [auth LQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Y [auth LQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
Y [auth LQ]IPR000039Large ribosomal subunit protein eL18Family
Y [auth LQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Z [auth LR]IPR056809GCN1-like, HEAT repeatsDomain
Z [auth LR]IPR016024Armadillo-type foldHomologous Superfamily
Z [auth LR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
Z [auth LR]IPR057546Stalled ribosome sensor GCN1-like, HEAT repeats regionDomain
Z [auth LR]IPR057260Ribosomal protein L19e, C-terminal domainDomain
Z [auth LR]IPR004155PBS lyase HEAT-like repeatRepeat
Z [auth LR]IPR034085TOG domainDomain
Z [auth LR]IPR019399Parkin co-regulated proteinFamily
Z [auth LR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
Z [auth LR]IPR021133HEAT, type 2Repeat
Z [auth LR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Z [auth LR]IPR057259Ribosomal protein L19e, N-terminal domainDomain
Z [auth LR]IPR011989Armadillo-like helicalHomologous Superfamily
Z [auth LR]IPR022716Gcn1, N-terminalDomain
Z [auth LR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Z [auth LR]IPR000196Large ribosomal subunit protein eL19 domainDomain
Z [auth LR]IPR056810Stalled ribosome sensor GCN1-like, N-terminalDomain
AA [auth LS]IPR028877Large ribosomal subunit protein eL20Family
AA [auth LS]IPR023573Large ribosomal subunit protein eL20 domainDomain
AA [auth LS]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
BA [auth LT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
BA [auth LT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
BA [auth LT]IPR001147Large ribosomal subunit protein eL21Family
BA [auth LT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
EA [auth LW]IPR056366Large ribosomal subunit protein eL24Family
EA [auth LW]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
EA [auth LW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
FA [auth LX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
FA [auth LX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
FA [auth LX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
FA [auth LX]IPR013025Large ribosomal subunit protein uL23-likeFamily
HA [auth LZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
HA [auth LZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
HA [auth LZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HA [auth LZ]IPR001141Large ribosomal subunit protein eL27Family
HA [auth LZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
JA [auth Lb]IPR002673Large ribosomal subunit protein eL29Family
LA [auth Ld]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
LA [auth Ld]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
LA [auth Ld]IPR000054Large ribosomal subunit protein eL31Family
OA [auth Lg]IPR008195Large ribosomal subunit protein eL34Family
OA [auth Lg]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
OA [auth Lg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
PA [auth Lh]IPR003674Oligosaccharyl transferase, STT3 subunitFamily
PA [auth Lh]IPR048307Oligosaccharyl transferase STT3, N-terminal domainDomain
PA [auth Lh]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
PA [auth Lh]IPR001854Large ribosomal subunit protein uL29Family
PA [auth Lh]IPR048999STT3/PglB/AglB, core domainDomain
QA [auth Li]IPR000509Large ribosomal subunit protein eL36Family
QA [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
RA [auth Lj]IPR001569Large ribosomal subunit protein eL37Family
RA [auth Lj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
RA [auth Lj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth Lj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
TA [auth Ll]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
TA [auth Ll]IPR000077Large ribosomal subunit protein eL39Family
UA [auth Lm]IPR048540Rrn7/TAF1B, N-terminal cyclin domainDomain
UA [auth Lm]IPR019954Ubiquitin conserved siteConserved Site
UA [auth Lm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
UA [auth Lm]IPR048538Rrn7/TAF1B, C-terminal cyclin domainDomain
UA [auth Lm]IPR000626Ubiquitin-like domainDomain
UA [auth Lm]IPR033599RNA polymerase I transcription initiation factor TAF1B/Rrn7Family
UA [auth Lm]IPR019956Ubiquitin domainDomain
UA [auth Lm]IPR001975Large ribosomal subunit protein eL40 domainDomain
UA [auth Lm]IPR021752Transcription initiation factor Rrn7, Zinc-fingerDomain
UA [auth Lm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
UA [auth Lm]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VA [auth Ln],
ZA [auth Lr]		IPR007836Large ribosomal subunit protein eS32Family
XA [auth Lp]IPR002674Large ribosomal subunit protein eL43Family
XA [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XA [auth Lp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
XA [auth Lp]IPR050522Eukaryotic ribosomal protein eL43Family
YA [auth Lq]IPR029004Ribosomal eL28/Mak16Domain
YA [auth Lq]IPR002672Large ribosomal subunit protein eL28Family
AB [auth Ls]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
AB [auth Ls]IPR001790Large ribosomal subunit protein uL10Family
AB [auth Ls]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
AB [auth Ls]IPR050323Universal ribosomal protein uL10Family
AB [auth Ls]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
AB [auth Ls]IPR030670Large ribosomal subunit protein uL10, eukaryotaFamily
CB [auth SB]IPR001593Small ribosomal subunit protein eS1Family
CB [auth SB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
CB [auth SB]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
EB [auth SD]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
EB [auth SD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
EB [auth SD]IPR057258Small ribosomal subunit protein uS3Family
EB [auth SD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
EB [auth SD]IPR004044K Homology domain, type 2Domain
EB [auth SD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
EB [auth SD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
EB [auth SD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
FB [auth SE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
FB [auth SE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
FB [auth SE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
FB [auth SE]IPR002942RNA-binding S4 domainDomain
FB [auth SE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
FB [auth SE]IPR000876Small ribosomal subunit protein eS4Family
FB [auth SE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FB [auth SE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
FB [auth SE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
FB [auth SE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
FB [auth SE]IPR005824KOWDomain
GB [auth SF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
GB [auth SF]IPR000235Small ribosomal subunit protein uS7Family
GB [auth SF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
GB [auth SF]IPR023798Small ribosomal subunit protein uS7 domainDomain
GB [auth SF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
HB [auth SG]IPR014401Small ribosomal subunit protein eS6-likeFamily
HB [auth SG]IPR001377Small ribosomal subunit protein eS6Family
HB [auth SG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
JB [auth SI]IPR001047Small ribosomal subunit protein eS8Family
JB [auth SI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
JB [auth SI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
KB [auth SJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
KB [auth SJ]IPR002942RNA-binding S4 domainDomain
KB [auth SJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
KB [auth SJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
KB [auth SJ]IPR022801Small ribosomal subunit protein uS4Family
KB [auth SJ]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
LB [auth SK]IPR037447Small ribosomal subunit protein eS10Family
LB [auth SK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
LB [auth SK]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
LB [auth SK]IPR005326Plectin/eS10, N-terminalDomain
MB [auth SL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
MB [auth SL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MB [auth SL]IPR000266Small ribosomal subunit protein uS17Family
MB [auth SL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
MB [auth SL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
NB [auth SM]IPR000530Small ribosomal subunit protein eS12Family
NB [auth SM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
NB [auth SM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
NB [auth SM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
OB [auth SN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
OB [auth SN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
OB [auth SN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
OB [auth SN]IPR000589Small ribosomal subunit protein uS15Family
PB [auth SO]IPR001971Small ribosomal subunit protein uS11Family
PB [auth SO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
PB [auth SO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
RB [auth SQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
RB [auth SQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
RB [auth SQ]IPR000754Small ribosomal subunit protein uS9Family
RB [auth SQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
SB [auth SR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
SB [auth SR]IPR001210Small ribosomal subunit protein eS17Family
SB [auth SR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
TB [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
TB [auth SS]IPR001892Small ribosomal subunit protein uS13Family
TB [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
TB [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
UB [auth ST]IPR001266Small ribosomal subunit protein eS19Family
UB [auth ST]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
UB [auth ST]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
VB [auth SU]IPR001848Small ribosomal subunit protein uS10Family
VB [auth SU]IPR027486Small ribosomal subunit protein uS10 domainDomain
VB [auth SU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
VB [auth SU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
VB [auth SU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
WB [auth SV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
WB [auth SV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
WB [auth SV]IPR001931Small ribosomal subunit protein eS21Family
XB [auth SW]IPR000630Small ribosomal subunit protein uS8Family
XB [auth SW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
XB [auth SW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
ZB [auth SY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
ZB [auth SY]IPR001976Small ribosomal subunit protein eS24Family
ZB [auth SY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
ZB [auth SY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
BC [auth Sa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
BC [auth Sa]IPR000892Small ribosomal subunit protein eS26Family
BC [auth Sa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
EC [auth Sd]IPR001209Small ribosomal subunit protein uS14Family
EC [auth Sd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
EC [auth Sd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
EC [auth Sd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
GC [auth Sf]IPR019954Ubiquitin conserved siteConserved Site
GC [auth Sf]IPR000626Ubiquitin-like domainDomain
GC [auth Sf]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
GC [auth Sf]IPR002906Small ribosomal subunit protein eS31Domain
GC [auth Sf]IPR019956Ubiquitin domainDomain
GC [auth Sf]IPR050158Ubiquitin and ubiquitin-likeFamily
GC [auth Sf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
GC [auth Sf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FC [auth Se]IPR006846Small ribosomal subunit protein eS30Family
DC [auth Sc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
DC [auth Sc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DC [auth Sc]IPR000289Small ribosomal subunit protein eS28Family
CC [auth Sb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
CC [auth Sb]IPR000592Small ribosomal subunit protein eS27Family
CC [auth Sb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth SZ]IPR004977Small ribosomal subunit protein eS25Family
AC [auth SZ]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
YB [auth SX]IPR006032Small ribosomal subunit protein uS12Family
YB [auth SX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
YB [auth SX]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
QB [auth SP]IPR002222Small ribosomal subunit protein uS19Family
QB [auth SP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
QB [auth SP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
QB [auth SP]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
IB [auth SH]IPR000554Small ribosomal subunit protein eS7Family
IB [auth SH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
DB [auth SC]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
DB [auth SC]IPR000851Small ribosomal subunit protein uS5Family
DB [auth SC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
DB [auth SC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
DB [auth SC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
DB [auth SC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
DB [auth SC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
BB [auth SA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
BB [auth SA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
BB [auth SA]IPR001865Small ribosomal subunit protein uS2Family
BB [auth SA]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
BB [auth SA]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
WA [auth Lo]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
WA [auth Lo]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WA [auth Lo]IPR000552Large ribosomal subunit protein eL42Family
SA [auth Lk]IPR002675Large ribosomal subunit protein eL38Family
SA [auth Lk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
NA [auth Lf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
NA [auth Lf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
NA [auth Lf]IPR001780Large ribosomal subunit protein eL33Family
NA [auth Lf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
MA [auth Le]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
MA [auth Le]IPR001515Large ribosomal subunit protein eL32Family
KA [auth Lc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
KA [auth Lc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
KA [auth Lc]IPR000231Large ribosomal subunit protein eL30Family
KA [auth Lc]IPR039109Large ribosomal subunit protein eL30-likeFamily
KA [auth Lc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
GA [auth LY]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
GA [auth LY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
GA [auth LY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
GA [auth LY]IPR005824KOWDomain
GA [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth LV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
DA [auth LV]IPR000218Large ribosomal subunit protein uL14Family
DA [auth LV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
CA [auth LU]IPR002671Large ribosomal subunit protein eL22Family
CA [auth LU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
R [auth LJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
R [auth LJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
R [auth LJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
R [auth LJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
R [auth LJ]IPR002132Large ribosomal subunit protein uL5Family
M [auth LE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
M [auth LE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
M [auth LE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
M [auth LE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
M [auth LE]IPR000915Large ribosomal subunit protein eL6Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B [auth 2]B8N
H [auth C]DDE Parent Component: HIS

RESID:  AA0040

PSI-MOD :  2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine MOD:00049